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黑肉齿菌 Gel/Gas 蛋白的表达和系统发育分析为真菌中葡聚糖重塑酶的功能和进化提供了线索。

Expression and phylogenetic analyses of the Gel/Gas proteins of Tuber melanosporum provide insights into the function and evolution of glucan remodeling enzymes in fungi.

机构信息

Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli 25, 10125 Torino, Italy.

出版信息

Fungal Genet Biol. 2013 Apr;53:10-21. doi: 10.1016/j.fgb.2013.01.010. Epub 2013 Feb 28.

DOI:10.1016/j.fgb.2013.01.010
PMID:23454547
Abstract

The β(1,3)-glucanosyltransferases of the GH72 family are redundant enzymes that are essential for the formation and dynamic remodeling of the fungal wall during different stages of the life cycle. Four putative genes encoding glycosylphosphatidylinositol (GPI)-anchored β(1,3)-glucanosyltransferases, designated TmelGEL1, TmelGEL2, TmelGEL4 and TmelGAS4, have been annotated in the genome of Tuber melanosporum, an ectomycorrhizal fungus that also produces a hypogeous fruiting body (FB) of great commercial value (black truffle). This work focuses on the characterization and expression of this multigene family by taking advantage of a laser microdissection (LMD) technology that has been used to separate two distinct compartments in the FB, the hyphae and the asci containing the ascospores. Of the four genes, TmelGEL1 was the most up-regulated in the FB compared to the free-living mycelium. Inside the FB, the expression of TmelGEL1 was restricted to the hyphal compartment. A phylogenetic analysis of the Gel/Gas protein family of T. melanosporum was also carried out. A total of 237 GH72 proteins from 51 Ascomycotina and 3 Basidiomycota (outgroup) species were analyzed. The resulting tree provides insight into the evolution of the T. melanosporum proteins and identifies new GH72 paralogs/subfamilies. Moreover, it represents a starting point to formulate new hypotheses on the significance of the striking GH72 gene redundancy in fungal biology.

摘要

GH72 家族的β(1,3)-葡聚糖转移酶是冗余酶,对于真菌壁在生命周期不同阶段的形成和动态重塑是必不可少的。在块菌(一种外生菌根真菌,也能产生具有巨大商业价值的地下果实(FB))的基因组中,已经注释了四个假定的编码糖基磷脂酰肌醇(GPI)锚定β(1,3)-葡聚糖转移酶的基因,分别命名为 TmelGEL1、TmelGEL2、TmelGEL4 和 TmelGAS4。这项工作利用激光显微切割(LMD)技术来分离 FB 中的两个不同隔室,即菌丝和含有子囊孢子的子囊,从而对这个多基因家族进行了特征描述和表达分析。在 FB 中,与自由生活的菌丝体相比,四个基因中 TmelGEL1 的表达上调最为明显。在 FB 内部,TmelGEL1 的表达仅限于菌丝隔室。还对 T. melanosporum 的 Gel/Gas 蛋白家族进行了系统发育分析。总共分析了来自 51 个子囊菌和 3 个担子菌(外群)物种的 237 个 GH72 蛋白。生成的树提供了对 T. melanosporum 蛋白进化的深入了解,并确定了新的 GH72 旁系/亚家族。此外,它为在真菌生物学中 GH72 基因冗余的显著意义上提出新的假设提供了一个起点。

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