Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee , Knoxville, Tennessee 37996-0840, United States.
Biochemistry. 2013 Mar 26;52(12):2118-27. doi: 10.1021/bi301544k. Epub 2013 Mar 14.
Previous osmotic pressure studies of two nonhomologous dihydrofolate reductase (DHFR) enzymes found tighter binding of the nicotinamide adenine dinucleotide phosphate cofactor upon addition of neutral osmolytes. This result is consistent with water release accompanying binding. In contrast, osmotic stress studies found weaker binding of the dihydrofolate (DHF) substrate for both type I and type II DHFRs in the presence of osmolytes; this observation can be explained if dihydrofolate interacts with osmolytes and shifts the equilibrium from the enzyme-bound state toward the unbound substrate. Nuclear magnetic resonance experiments support this hypothesis, finding that osmolytes interact with dihydrofolate. To consider binding without added osmolytes, a high-pressure approach was used. In this study, the type II enzyme, R67 DHFR, was subjected to high hydrostatic pressure (HHP). Both enzyme activity and fluorescence measurements find the protein tolerates pressures up to 200 MPa. Binding of the cofactor to R67 DHFR weakens with increasing pressure, and a positive association volume of 11.4 ± 0.5 cm(3)/mol was measured. Additionally, an activation volume of 3.3 ± 0.5 cm(3)/mol describing k(cat)/K(m(DHF)) was determined from progress curve analysis. Results from these HHP experiments suggest water release accompanies binding of both the cofactor and DHF to R67 DHFR. In an additional set of experiments, isothermal titration calorimetry studies in H2O and D2O find that water reorganization dominates the enthalpy associated with binding of DHF to R67 DHFR·NADP(+), while no obvious effects occur for cofactor binding. The combined results indicate that water plays an active role in ligand binding to R67 DHFR.
先前对两种非同源二氢叶酸还原酶 (DHFR) 酶的渗透压研究发现,加入中性渗透物后,烟酰胺腺嘌呤二核苷酸磷酸辅因子的结合更加紧密。这一结果与结合伴随的水分子释放一致。相比之下,渗透压应激研究发现,在渗透物存在的情况下,I 型和 II 型 DHFR 对二氢叶酸 (DHF) 底物的结合较弱;如果二氢叶酸与渗透物相互作用并将平衡从酶结合状态转移到未结合的底物,就可以解释这种观察结果。核磁共振实验支持这一假设,发现渗透物与二氢叶酸相互作用。为了考虑没有添加渗透物的结合,采用了高压方法。在这项研究中,II 型酶 R67 DHFR 受到高静水压力 (HHP) 的影响。酶活性和荧光测量都发现该蛋白质可以耐受高达 200 MPa 的压力。辅酶与 R67 DHFR 的结合随着压力的增加而减弱,测量到的正关联体积为 11.4 ± 0.5 cm3/mol。此外,通过进展曲线分析确定了描述 k(cat)/K(m(DHF))的激活体积为 3.3 ± 0.5 cm3/mol。这些 HHP 实验的结果表明,水分子的释放伴随着辅酶和 DHF 与 R67 DHFR 的结合。在一组额外的实验中,在 H2O 和 D2O 中的等温滴定量热法研究发现,水的重组主导了与 R67 DHFR·NADP(+)结合的 DHF 的焓,而辅酶结合则没有明显的影响。综合结果表明,水在配体与 R67 DHFR 的结合中发挥了积极作用。