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超级模特:高粱和玉米为开花时间的遗传学研究提供了相互借鉴。

Supermodels: sorghum and maize provide mutual insight into the genetics of flowering time.

机构信息

Department of Agriculture, Forestry and Fisheries, Hermitage Research Station, 604 Yangan Road, Warwick, QLD 4370, Australia.

出版信息

Theor Appl Genet. 2013 May;126(5):1377-95. doi: 10.1007/s00122-013-2059-z. Epub 2013 Mar 5.

Abstract

Nested association mapping (NAM) offers power to dissect complex, quantitative traits. This study made use of a recently developed sorghum backcross (BC)-NAM population to dissect the genetic architecture of flowering time in sorghum; to compare the QTL identified with other genomic regions identified in previous sorghum and maize flowering time studies and to highlight the implications of our findings for plant breeding. A subset of the sorghum BC-NAM population consisting of over 1,300 individuals from 24 families was evaluated for flowering time across multiple environments. Two QTL analysis methodologies were used to identify 40 QTLs with predominately small, additive effects on flowering time; 24 of these co-located with previously identified QTL for flowering time in sorghum and 16 were novel in sorghum. Significant synteny was also detected with the QTL for flowering time detected in a comparable NAM resource recently developed for maize (Zea mays) by Buckler et al. (Science 325:714-718, 2009). The use of the sorghum BC-NAM population allowed us to catalogue allelic variants at a maximal number of QTL and understand their contribution to the flowering time phenotype and distribution across diverse germplasm. The successful demonstration of the power of the sorghum BC-NAM population is exemplified not only by correspondence of QTL previously identified in sorghum, but also by correspondence of QTL in different taxa, specifically maize in this case. The unification across taxa of the candidate genes influencing complex traits, such as flowering time can further facilitate the detailed dissection of the genetic control and causal genes.

摘要

嵌套关联作图 (NAM) 为剖析复杂的数量性状提供了有力的手段。本研究利用最近开发的高粱回交 (BC)-NAM 群体,剖析了高粱开花时间的遗传结构;将鉴定的 QTL 与之前高粱和玉米开花时间研究中鉴定的其他基因组区域进行比较,并强调了我们的研究结果对植物育种的意义。使用来自 24 个家系的超过 1300 个个体的高粱 BC-NAM 群体的一个子集,在多个环境中评估开花时间。使用两种 QTL 分析方法鉴定了 40 个 QTL,它们对开花时间主要具有小的加性效应;其中 24 个与高粱开花时间的先前鉴定的 QTL 共定位,16 个是高粱中的新 QTL。还检测到与 Buckler 等人最近为玉米 (Zea mays) 开发的可比 NAM 资源中鉴定的开花时间 QTL 之间的显著同线性 (Science 325:714-718, 2009)。利用高粱 BC-NAM 群体,我们能够在最大数量的 QTL 目录中记录等位基因变体,并了解它们对开花时间表型的贡献及其在不同种质中的分布。不仅通过对应高粱中先前鉴定的 QTL,而且通过对应不同分类群中的 QTL,特别是在这种情况下的玉米,成功地证明了高粱 BC-NAM 群体的强大功能。影响复杂性状(如花开花时间)的候选基因在不同分类群中的统一,可以进一步促进遗传控制和因果基因的详细剖析。

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