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单体型频率指数(HI)方法揭示了撒丁岛人群中威尔逊病的高等位基因频率。

The homozygosity index (HI) approach reveals high allele frequency for Wilson disease in the Sardinian population.

机构信息

1] Unità Operativa di Genetica Medica, Dipartimento di Scienze Mediche e Chirurgiche Policlinico Sant'Orsola-Malpighi, Bologna, Italy [2] Language and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, The Netherlands.

出版信息

Eur J Hum Genet. 2013 Nov;21(11):1308-11. doi: 10.1038/ejhg.2013.43. Epub 2013 Mar 13.

Abstract

Wilson disease (WD) is an autosomal recessive disorder resulting in pathological progressive copper accumulation in liver and other tissues. The worldwide prevalence (P) is about 30/million, while in Sardinia it is in the order of 1/10,000. However, all of these estimates are likely to suffer from an underdiagnosis bias. Indeed, a recent molecular neonatal screening in Sardinia reported a WD prevalence of 1:2707. In this study, we used a new approach that makes it possible to estimate the allelic frequency (q) of an autosomal recessive disorder if one knows the proportion between homozygous and compound heterozygous patients (the homozygosity index or HI) and the inbreeding coefficient (F) in a sample of affected individuals. We applied the method to a set of 178 Sardinian individuals (3 of whom born to consanguineous parents), each with a clinical and molecular diagnosis of WD. Taking into account the geographical provenance of the parents of every patient within Sardinia (to make F computation more precise), we obtained a q=0.0191 (F=7.8 × 10(-4), HI=0.476) and a corresponding prevalence P=1:2732. This result confirms that the prevalence of WD is largely underestimated in Sardinia. On the other hand, the general reliability and applicability of the HI approach to other autosomal recessive disorders is confirmed, especially if one is interested in the genetic epidemiology of populations with high frequency of consanguineous marriages.

摘要

威尔逊病 (WD) 是一种常染色体隐性遗传病,导致肝脏和其他组织中病理性的铜蓄积。全球患病率 (P) 约为 30/百万,而在撒丁岛则为 1/10000。然而,所有这些估计都可能存在诊断不足的偏差。事实上,撒丁岛最近的一项分子新生儿筛查报告 WD 的患病率为 1:2707。在这项研究中,我们使用了一种新方法,如果知道纯合子和复合杂合子患者之间的比例(同型率或 HI)以及受影响个体样本中的近交系数 (F),就可以估计常染色体隐性疾病的等位基因频率 (q)。我们将该方法应用于一组 178 名撒丁岛个体(其中 3 名出生于近亲结婚的父母),每个个体都有 WD 的临床和分子诊断。考虑到撒丁岛每位患者父母的地理来源(使 F 计算更精确),我们得到了 q=0.0191(F=7.8×10(-4),HI=0.476)和相应的患病率 P=1:2732。这一结果证实,WD 在撒丁岛的患病率被大大低估了。另一方面,HI 方法对其他常染色体隐性疾病的普遍可靠性和适用性得到了证实,特别是如果人们对近亲结婚频率较高的人群的遗传流行病学感兴趣。

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