Linshiz Gregory, Goldberg Alex, Konry Tania, Hillson Nathan J
Fuels Synthesis Division, Joint BioEnergy Institute, Emeryville, CA 94608, USA.
Perspect Biol Med. 2012;55(4):503-20. doi: 10.1353/pbm.2012.0044.
Synthetic biology is a nascent field that emerged in earnest only around the turn of the millennium. It aims to engineer new biological systems and impart new biological functionality, often through genetic modifications. The design and construction of new biological systems is a complex, multistep process, requiring multidisciplinary collaborative efforts from "fusion" scientists who have formal training in computer science or engineering, as well as hands-on biological expertise. The public has high expectations for synthetic biology and eagerly anticipates the development of solutions to the major challenges facing humanity. This article discusses laboratory practices and the conduct of research in synthetic biology. It argues that the fusion science approach, which integrates biology with computer science and engineering best practices, including standardization, process optimization, computer-aided design and laboratory automation, miniaturization, and systematic management, will increase the predictability and reproducibility of experiments and lead to breakthroughs in the construction of new biological systems. The article also discusses several successful fusion projects, including the development of software tools for DNA construction design automation, recursive DNA construction, and the development of integrated microfluidics systems.
合成生物学是一个新兴领域,大约在世纪之交才真正兴起。它旨在设计新的生物系统并赋予其新的生物学功能,通常是通过基因改造来实现。新生物系统的设计和构建是一个复杂的多步骤过程,需要具备计算机科学或工程学正规训练以及实际生物学专业知识的“融合”科学家进行多学科协作。公众对合成生物学寄予厚望,并热切期待能够开发出解决人类面临的重大挑战的方案。本文讨论了合成生物学的实验室实践和研究开展情况。文章认为,将生物学与计算机科学和工程学的最佳实践(包括标准化、流程优化、计算机辅助设计、实验室自动化、小型化和系统管理)相结合的融合科学方法,将提高实验的可预测性和可重复性,并在新生物系统的构建方面取得突破。文章还讨论了几个成功的融合项目,包括用于DNA构建设计自动化、递归DNA构建的软件工具的开发,以及集成微流控系统的开发。