• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

DNA 超螺旋和类核相关蛋白在细菌转录调控中的合作作用。

Co-operative roles for DNA supercoiling and nucleoid-associated proteins in the regulation of bacterial transcription.

机构信息

Department of Microbiology, Moyne Institute of Preventive Medicine, Trinity College, Dublin 2, Ireland.

出版信息

Biochem Soc Trans. 2013 Apr;41(2):542-7. doi: 10.1042/BST20120222.

DOI:10.1042/BST20120222
PMID:23514151
Abstract

DNA supercoiling and NAPs (nucleoid-associated proteins) contribute to the regulation of transcription of many bacterial genes. The horizontally acquired SPI (Salmonella pathogenicity island) genes respond positively to DNA relaxation, they are activated and repressed by the Fis (factor for inversion stimulation) and H-NS (histone-like nucleoid-structuring) NAPs respectively, and are positively controlled by the OmpR global regulatory protein. The ompR gene is autoregulated and responds positively to DNA relaxation. Binding of the Fis and OmpR proteins to their targets in DNA is differentially sensitive to its topological state, whereas H-NS binds regardless of the topological state of the DNA. These data illustrate the overlapping and complex nature of NAP and DNA topological contributions to transcription control in bacteria.

摘要

DNA 超螺旋和 NAPs(核小体相关蛋白)有助于调节许多细菌基因的转录。水平获得的 SPI(沙门氏菌致病性岛)基因对 DNA 松弛反应呈正响应,它们分别被 Fis(反转刺激因子)和 H-NS(组蛋白样核结构)NAPs 激活和抑制,并受到 OmpR 全局调节蛋白的正调控。ompR 基因是自身调控的,对 DNA 松弛反应呈正响应。Fis 和 OmpR 蛋白与 DNA 中靶标的结合对其拓扑状态具有不同的敏感性,而 H-NS 则与 DNA 的拓扑状态无关。这些数据说明了 NAP 和 DNA 拓扑结构对细菌转录调控的重叠和复杂性质。

相似文献

1
Co-operative roles for DNA supercoiling and nucleoid-associated proteins in the regulation of bacterial transcription.DNA 超螺旋和类核相关蛋白在细菌转录调控中的合作作用。
Biochem Soc Trans. 2013 Apr;41(2):542-7. doi: 10.1042/BST20120222.
2
A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2.一种通过 OmpR 和 DNA 拓扑结构起作用的基本调控机制控制着沙门氏菌致病性岛 SPI-1 和 SPI-2 的表达。
PLoS Genet. 2012;8(3):e1002615. doi: 10.1371/journal.pgen.1002615. Epub 2012 Mar 22.
3
The nucleoid-associated proteins H-NS and FIS modulate the DNA supercoiling response of the pel genes, the major virulence factors in the plant pathogen bacterium Dickeya dadantii.类核相关蛋白 H-NS 和 FIS 调节植物病原菌迪克氏菌 pel 基因的 DNA 超螺旋响应,pel 基因是该菌的主要毒力因子。
Nucleic Acids Res. 2012 May;40(10):4306-19. doi: 10.1093/nar/gks014. Epub 2012 Jan 24.
4
The response regulator SsrB activates expression of diverse Salmonella pathogenicity island 2 promoters and counters silencing by the nucleoid-associated protein H-NS.应答调节因子SsrB可激活多种沙门氏菌致病岛2启动子的表达,并对抗类核相关蛋白H-NS介导的基因沉默。
Mol Microbiol. 2007 Jul;65(2):477-93. doi: 10.1111/j.1365-2958.2007.05800.x.
5
Roles for DNA supercoiling and the Fis protein in modulating expression of virulence genes during intracellular growth of Salmonella enterica serovar Typhimurium.DNA超螺旋和Fis蛋白在鼠伤寒沙门氏菌胞内生长期间调控毒力基因表达中的作用。
Mol Microbiol. 2006 Nov;62(3):869-82. doi: 10.1111/j.1365-2958.2006.05416.x. Epub 2006 Sep 25.
6
[The bacterial nucleoid].[细菌拟核]
Rev Latinoam Microbiol. 1995 Jul-Sep;37(3):281-90.
7
H-NS mediates the silencing of laterally acquired genes in bacteria.H-NS介导细菌中横向获得基因的沉默。
PLoS Pathog. 2006 Aug;2(8):e81. doi: 10.1371/journal.ppat.0020081.
8
Control of Salmonella pathogenicity island-2 gene expression.鼠伤寒沙门氏菌致病岛-2基因表达的调控
Curr Opin Microbiol. 2009 Apr;12(2):199-204. doi: 10.1016/j.mib.2009.01.004. Epub 2009 Mar 4.
9
Gene clusters reflecting macrodomain structure respond to nucleoid perturbations.反映宏结构域结构的基因簇对类核扰动作出反应。
Mol Biosyst. 2011 Mar;7(3):878-88. doi: 10.1039/c0mb00213e. Epub 2010 Dec 16.
10
Flagellar and global gene regulation in Helicobacter pylori modulated by changes in DNA supercoiling.幽门螺杆菌中鞭毛和全局基因调控受DNA超螺旋变化的调节。
Int J Med Microbiol. 2007 Apr;297(2):65-81. doi: 10.1016/j.ijmm.2006.11.006. Epub 2007 Feb 1.

引用本文的文献

1
DNA supercoiling-mediated G4/R-loop formation tunes transcription by controlling the access of RNA polymerase.DNA超螺旋介导的G4/R环形成通过控制RNA聚合酶的进入来调节转录。
Nat Commun. 2025 Apr 9;16(1):3363. doi: 10.1038/s41467-025-58479-x.
2
Structure of the E. coli nucleoid-associated protein YejK reveals a novel DNA binding clamp.大肠杆菌核相关蛋白 YejK 的结构揭示了一种新的 DNA 结合夹。
Nucleic Acids Res. 2024 Jul 8;52(12):7354-7366. doi: 10.1093/nar/gkae459.
3
Molecular insights into the fine-tuning of pH-dependent ArsR-mediated regulation of the SabA adhesin in Helicobacter pylori.
深入了解 pH 依赖性 ArsR 介导的幽门螺杆菌 SabA 黏附素调节的分子机制。
Nucleic Acids Res. 2024 Jun 10;52(10):5572-5595. doi: 10.1093/nar/gkae188.
4
Assessing in vivo the impact of gene context on transcription through DNA supercoiling.通过DNA超螺旋在体内评估基因环境对转录的影响。
Nucleic Acids Res. 2023 Oct 13;51(18):9509-9521. doi: 10.1093/nar/gkad688.
5
EbfC/YbaB: A Widely Distributed Nucleoid-Associated Protein in Prokaryotes.EbfC/YbaB:一种在原核生物中广泛分布的类核相关蛋白。
Microorganisms. 2022 Sep 30;10(10):1945. doi: 10.3390/microorganisms10101945.
6
Single-molecule insights into torsion and roadblocks in bacterial transcript elongation.对细菌转录延伸过程中扭转和障碍的单分子见解。
Transcription. 2021 Aug;12(4):219-231. doi: 10.1080/21541264.2021.1997315. Epub 2021 Nov 1.
7
Temperature effects on RNA polymerase initiation kinetics reveal which open complex initiates and that bubble collapse is stepwise.温度对 RNA 聚合酶起始动力学的影响揭示了哪个开放复合物起始,以及泡囊塌陷是逐步进行的。
Proc Natl Acad Sci U S A. 2021 Jul 27;118(30). doi: 10.1073/pnas.2021941118.
8
Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.在环境适应过程中,类核重塑受 HU 依赖的 DNA 束的调控。
Nat Commun. 2020 Jun 9;11(1):2905. doi: 10.1038/s41467-020-16724-5.
9
Early fate of exogenous promoters in E. coli.大肠杆菌中外源启动子的早期命运。
Nucleic Acids Res. 2020 Mar 18;48(5):2348-2356. doi: 10.1093/nar/gkz1196.
10
Rules and Exceptions: The Role of Chromosomal ParB in DNA Segregation and Other Cellular Processes.规则与例外:染色体ParB在DNA分离及其他细胞过程中的作用
Microorganisms. 2020 Jan 11;8(1):0. doi: 10.3390/microorganisms8010105.