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从偶联的表观遗传景观分析发育中的嗅觉神经元的分化。

Differentiation of developing olfactory neurons analysed in terms of coupled epigenetic landscapes.

机构信息

Center for Models of Life, Niels Bohr Institute, University of Copenhagen, Blegdamsvej 17, 2100 Copenhagen, Denmark.

出版信息

Nucleic Acids Res. 2013 May;41(9):4755-64. doi: 10.1093/nar/gkt181. Epub 2013 Mar 21.

Abstract

The olfactory system integrates signals from receptors expressed in olfactory sensory neurons. Each sensory neuron expresses only one of many similar olfactory receptors (ORs). The choice of receptor is made stochastically early in the differentiation process and is maintained throughout the life of the neuron. The underlying mechanism of this stochastic commitment to one of multiple similar OR genes remains elusive. We present a theoretical analysis of a mechanism that invokes important epigenetic properties of the system. The proposed model combines nucleosomes and associated read-write enzymes as mediators of a cis-acting positive feedback with a trans-acting negative feedback, thereby coupling the local epigenetic landscape of the individual OR genes in a way that allow one and only one gene to be active at any time. The model pinpoint that singular gene selection does not require transient mechanisms, enhancer elements or transcription factors to separate choice from maintenance. In addition, our hypothesis allow us to combine all reported characteristics of singular OR gene selection, in particular that OR genes are silenced from OR transgenes. Intriguingly, it predicts that OR transgenes placed in close proximity should always be expressed simultaneously, though rarely.

摘要

嗅觉系统整合了嗅觉感觉神经元中表达的受体信号。每个感觉神经元仅表达许多相似的嗅觉受体 (OR) 之一。受体的选择是在分化过程的早期随机做出的,并在神经元的整个生命周期中保持不变。这种对多个相似 OR 基因之一的随机承诺的潜在机制仍然难以捉摸。我们提出了一种机制的理论分析,该机制利用了系统的重要表观遗传特性。所提出的模型将核小体和相关的读写酶作为顺式作用正反馈与反式作用负反馈的介质,从而以一种允许一个且仅一个基因在任何时间都处于活跃状态的方式将单个 OR 基因的局部表观遗传景观耦合在一起。该模型指出,单一基因选择不需要瞬态机制、增强子元件或转录因子来将选择与维持分开。此外,我们的假设允许我们将单一 OR 基因选择的所有报告特征结合起来,特别是 OR 基因从 OR 转基因沉默。有趣的是,它预测放置在接近位置的 OR 转基因应该始终同时表达,尽管很少见。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a00/3643594/369de27f7aea/gkt181f1p.jpg

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