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克里贝拉希拉兹ensis 新种,从伊朗土壤中分离得到。

Kribbella shirazensis sp. nov., isolated from Iranian soil.

机构信息

University of Tehran Microorganisms Collection (UTMC), Microbial Technology and Products Research Center, University of Tehran, Tehran, Iran.

Microbial Biotechnology Laboratory, Department of Microbiology, School of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, 14155-6455 Tehran, Iran.

出版信息

Int J Syst Evol Microbiol. 2013 Sep;63(Pt 9):3369-3374. doi: 10.1099/ijs.0.046847-0. Epub 2013 Mar 22.

Abstract

The taxonomic position of a strain isolated from soil in Shiraz, Fars province, Iran, was investigated. Strain UTMC 693(T) produced an extensively branched substrate mycelium and aerial hyphae consisting of hyphae that fragment into short to elongated rod-like elements. The chemotaxonomic characteristics of the isolate matched those described for the genus Kribbella. Strain UTMC 693(T) showed the highest 16S rRNA gene sequence similarity to Kribbella karoonensis DSM 17344(T) (98.3%), K. swartbergensis DSM 17345(T) (98.2%), K. hippodromi S1.4(T) (98.0%), K. aluminosa HKI 0478(T) (98.0%) and K. jejuensis HD9(T) (98.0%). DNA-DNA hybridization studies with closely related type strains showed 56.3% relatedness to K. karoonensis, 21.3% to K. swartbergensis, 39.0% to K. jejuensis and 42.0% to K. aluminosa. Thus, strain UTMC 693(T) can be considered to represent a novel Kribbella species. Strain UTMC 693(T) showed the typical morphology found among members of Kribbella, but can be differentiated easily from closely related species by genotypic characteristics, chemotaxonomic results and other phenotypic markers. Based on these results, strain UTMC 693(T) ( =DSM 45490(T) =CCUG 61792(T)) is considered the type strain of a novel species of the genus Kribbella, for which the name Kribbella shirazensis sp. nov. is proposed.

摘要

从伊朗法尔斯省设拉子的土壤中分离到的一株菌的分类地位进行了研究。菌株 UTMC 693(T) 产生了广泛分支的基质菌丝和气生菌丝,由菌丝片段形成短至长的杆状元素。该分离株的化学分类特征与 Kribbella 属的描述相符。菌株 UTMC 693(T) 与 Kribbella karoonensis DSM 17344(T)(98.3%)、K. swartbergensis DSM 17345(T)(98.2%)、K. hippodromi S1.4(T)(98.0%)、K. aluminosa HKI 0478(T)(98.0%)和 K. jejuensis HD9(T)(98.0%)的 16S rRNA 基因序列相似度最高。与密切相关的模式株的 DNA-DNA 杂交研究表明,与 K. karoonensis 的相关性为 56.3%,与 K. swartbergensis 的相关性为 21.3%,与 K. jejuensis 的相关性为 39.0%,与 K. aluminosa 的相关性为 42.0%。因此,菌株 UTMC 693(T) 可被视为代表一种新的 Kribbella 物种。菌株 UTMC 693(T) 表现出 Kribbella 属成员中发现的典型形态,但通过基因型特征、化学分类结果和其他表型标记可与密切相关的物种轻松区分。基于这些结果,菌株 UTMC 693(T)(=DSM 45490(T)=CCUG 61792(T))被认为是 Kribbella 属一个新种的模式株,该新种命名为 Kribbella shirazensis sp. nov.。

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