Ozdemir-Kocak Fadime, Isik Kamil, Saricaoglu Salih, Saygin Hayrettin, Inan-Bektas Kadriye, Cetin Demet, Guven Kiymet, Sahin Nevzat
Department of Nursing, School of Health, Bilecik Seyh Edebali University, 11210, Bilecik, Turkey.
Biotechnology Applied and Research Center, Bilecik Seyh Edebali University, 11230, Bilecik, Turkey.
Arch Microbiol. 2017 Dec;199(10):1399-1407. doi: 10.1007/s00203-017-1414-x. Epub 2017 Jul 26.
A Kribbella strain FSN23 was isolated from soil sample which was collected from Caygoren Dam lakeside located in Sındırgı, Turkey. The isolate was investigated using a polyphasic approach consisting of numeric, chemotaxonomic and molecular analysis. The isolate indicated chemotaxonomic, morphological and phylogenetic properties associated with members of the genus Kribbella. Phylogenetic analysis based on the 16S rRNA sequence of the strain demonstrated that the strain forms a subclade with K. aluminosa HKI 0478 and K. jejuensis HD9. The organism formed an extensively branched substrate and aerial hyphae which generated spiral chains of spores with smooth surfaces. The cell wall contained LL-diaminopimelic acid, and the whole cell sugars were glucose and ribose along with trace amounts of mannose. The polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol, four unidentified lipids and five unidentified polar lipids. The predominant menaquinone was MK-9(H). The major cellular fatty acids were anteiso-C and iso-C. Polyphasic taxonomy properties confirm that strain FSN23 represents a novel Kribbella taxon distinguished from closely related type strains. Hence, strain FSN23 (=KCTC 29220 = DSM 27082) is proposed as the type strain of a novel species with the name Kribbella sindirgiensis sp. nov.
从土耳其辛迪尔吉的凯伊戈伦大坝湖边采集的土壤样本中分离出一株克里贝拉菌株FSN23。使用包括数值分析、化学分类分析和分子分析在内的多相方法对该分离株进行了研究。该分离株显示出与克里贝拉属成员相关的化学分类、形态和系统发育特性。基于该菌株16S rRNA序列的系统发育分析表明,该菌株与铝土矿克里贝拉HKI 0478和济州岛克里贝拉HD9形成一个亚分支。该菌形成了广泛分支的基内菌丝和气生菌丝,产生表面光滑的螺旋状孢子链。细胞壁含有LL-二氨基庚二酸,全细胞糖为葡萄糖和核糖以及微量甘露糖。极性脂质被鉴定为磷脂酰甘油、二磷脂酰甘油、四种未鉴定的脂质和五种未鉴定的极性脂质。主要的甲基萘醌是MK-9(H)。主要的细胞脂肪酸是anteiso-C和iso-C。多相分类学特性证实菌株FSN23代表一个与密切相关的模式菌株不同的新克里贝拉分类单元。因此,提议将菌株FSN23(=KCTC 29220 = DSM 27082)作为一个新物种的模式菌株,命名为辛迪尔吉克里贝拉(Kribbella sindirgiensis sp. nov.)。