Al-Quds University, Faculty of Pharmacy, Department of Bioorganic & Pharmaceutical Chemistry, P.O. Box 20002 Jerusalem , Palestine.
Expert Opin Drug Deliv. 2013 May;10(5):713-29. doi: 10.1517/17425247.2013.786699. Epub 2013 Mar 31.
The revolution in computational chemistry greatly impacted the drug design and delivery fields, in general, and recently the utilization of the prodrug approach in particular. The use of ab initio, semiempirical and molecular mechanics methods to understand organic reaction mechanisms of certain processes, especially intramolecular reactions, has opened the door to design and to rapidly produce safe and efficacious delivery of a wide range of active small molecule and biotherapeutics such as prodrugs.
This article provides the readers with a concise overview of this modern approach to prodrug design. The use of computational approaches, such as density functional theory (DFT), semiempirical and ab initio molecular orbital methods, in modern prodrugs design will be discussed. The novel prodrug approach to be reported in this review implies prodrug design based on enzyme model (mimicking enzyme catalysis) that has been utilized to understand how enzymes work. The tool used in the design is a computational approach consisting of calculations using molecular orbital and molecular mechanics methods (DFT, ab initio and MM2) and correlations between experimental and calculated values of intramolecular processes that were used to understand the mechanism by which enzymes might exert their high rates catalysis.
The future of prodrug technology is exciting yet extremely challenging. Advances must be made in understanding the chemistry of many organic reactions that can be effectively utilized to enable the development of even more types of prodrugs. Despite the increase in the number of marketed prodrugs, we have only started to appreciate the potential of the prodrug approach in modern drug development, and the coming years will witness many novel prodrug innovations.
计算化学的革命极大地影响了药物设计和输送领域,特别是最近前药方法的利用。使用从头算、半经验和分子力学方法来理解某些过程(特别是分子内反应)的有机反应机制,为设计和快速生产安全有效的小分子和生物治疗药物(如前药)的广泛应用打开了大门。
本文为读者提供了对这种现代前药设计方法的简要概述。将讨论计算方法,如密度泛函理论(DFT)、半经验和从头算分子轨道方法,在现代前药设计中的应用。本综述中报告的新的前药方法意味着基于酶模型(模拟酶催化)的前药设计,该方法已被用于了解酶的工作方式。设计中使用的工具是一种计算方法,包括使用分子轨道和分子力学方法(DFT、从头算和 MM2)进行计算,以及实验和计算的分子内过程值之间的相关性,用于了解酶如何发挥其高催化速率的机制。
前药技术的未来令人兴奋但极具挑战性。必须在理解许多有机反应的化学方面取得进展,这些反应可以有效地用于开发更多类型的前药。尽管上市前药的数量有所增加,但我们才刚刚开始欣赏前药方法在现代药物开发中的潜力,未来几年将见证许多新的前药创新。