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晶格玻尔兹曼方法对类水流体的三维本内姆势的实现。

Lattice Boltzmann implementation of the three-dimensional Ben-Naim potential for water-like fluids.

机构信息

Freiburg Institute for Advanced Studies (FRIAS), University of Freiburg, Albertstrasse 19, 79104 Freiburg, Germany.

出版信息

J Chem Phys. 2013 Mar 28;138(12):124105. doi: 10.1063/1.4795008.

DOI:10.1063/1.4795008
PMID:23556707
Abstract

We develop a three-dimensional lattice Boltzmann (LB) model accounting for directional interactions between water-like molecules, based on the so-called Ben-Naim (BN) potential [A. Ben-Naim, Molecular Theory of Water and Aqueous Solutions: Part I: Understanding Water (World Scientific Publishing Company, 2010); "Statistical mechanics of 'waterlike' particles in two dimensions. I. Physical model and application of the Percus-Yevick equation," J. Chem. Phys. 54, 3682 (1971)]. The water-like molecules are represented by rigid tetrahedra, with two donors and two acceptors at the corners and interacting with neighboring tetrahedra, sitting on the nodes of a regular lattice. The tetrahedra are free to rotate about their centers under the drive of the torque arising from the interparticle potential. The orientations of the water molecules are evolved in time via an overdamped Langevin dynamics for the torque, which is solved by means of a quaternion technique. The resulting advection-diffusion-reaction equation for the quaternion components is solved by a LB method, acting as a dynamic minimizer for the global energy of the fluid. By adding thermal fluctuations to the torque equation, the model is shown to reproduce some microscopic features of real water, such as an average number of hydrogen bonds per molecules (HBs) between 3 and 4, in a qualitative agreement with microscopic water models. Albeit slower than a standard LB solver for ordinary fluids, the present scheme opens up potentially far-reaching scenarios for multiscale applications based on a coarse-grained representation of the water solvent.

摘要

我们开发了一个三维格子玻尔兹曼(LB)模型,该模型考虑了类似于水的分子之间的定向相互作用,基于所谓的 Ben-Naim(BN)势[阿贝·本奈姆(A. Ben-Naim),《水和水溶液的分子理论:第一部分:理解水》(世界科学出版社,2010 年);“二维中‘类水’粒子的统计力学。I. 应用 Percus-Yevick 方程的物理模型”,《J. Chem. Phys.》54, 3682(1971)]。类似于水的分子由刚性四面体表示,在角上有两个供体和两个受体,与相邻的四面体相互作用,位于规则格子的节点上。四面体在驱动力的作用下可以围绕中心自由旋转,该驱动力来自于粒子间的势能。通过超阻尼 Langevin 动力学对扭矩进行时间演化,利用四元数技术来求解。利用 LB 方法求解四元数分量的对流扩散反应方程,作为流体总能量的动态最小化器。通过向扭矩方程添加热波动,该模型显示出可以再现一些真实水的微观特征,例如每个分子的氢键(HBs)平均数量在 3 到 4 之间,与微观水模型定性一致。尽管与普通流体的标准 LB 求解器相比速度较慢,但该方案为基于水溶剂的粗粒化表示的多尺度应用开辟了潜在的广泛场景。

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