Department of Human Parasitology, School of Medicine, Shandong University, No 44 Wenhuaxi Road, Jinan, Shandong 250012, China.
Biomed Res Int. 2013;2013:165342. doi: 10.1155/2013/165342. Epub 2013 Mar 21.
Toxoplasma gondii is a protozoan parasite capable of infecting humans and animals. Surface antigen glycoproteins, SAG2C, -2D, -2X, and -2Y, are expressed on the surface of bradyzoites. These antigens have been shown to protect bradyzoites against immune responses during chronic infections. We studied structures of SAG2C, -2D, -2X, and -2Y proteins using bioinformatics methods. The protein sequence alignment was performed by T-Coffee method. Secondary structural and functional domains were predicted using software PSIPRED v3.0 and SMART software, and 3D models of proteins were constructed and compared using the I-TASSER server, VMD, and SWISS-spdbv. Our results showed that SAG2C, -2D, -2X, and -2Y are highly homologous proteins. They share the same conserved peptides and HLA-I restricted epitopes. The similarity in structure and domains indicated putative common functions that might stimulate similar immune response in hosts. The conserved peptides and HLA-restricted epitopes could provide important insights on vaccine study and the diagnosis of this disease.
刚地弓形虫是一种可以感染人类和动物的原生动物寄生虫。表面抗原糖蛋白 SAG2C、-2D、-2X 和 -2Y 表达于缓殖子表面。这些抗原已被证明可以在慢性感染期间保护缓殖子免受免疫反应的侵害。我们使用生物信息学方法研究了 SAG2C、-2D、-2X 和 -2Y 蛋白的结构。使用 T-Coffee 方法进行蛋白序列比对。使用 PSIPRED v3.0 和 SMART 软件预测二级结构和功能域,并使用 I-TASSER 服务器、VMD 和 SWISS-spdbv 构建和比较蛋白质的 3D 模型。我们的结果表明,SAG2C、-2D、-2X 和 -2Y 是高度同源的蛋白。它们具有相同的保守肽和 HLA-I 限制表位。结构和结构域的相似性表明存在可能在宿主中引起相似免疫反应的共同功能。保守肽和 HLA 限制表位可以为该疾病的疫苗研究和诊断提供重要的见解。