T. C. Jenkins Department of Biophysics, Johns Hopkins University , Baltimore, Maryland 21218, United States.
Biochemistry. 2013 May 21;52(20):3478-88. doi: 10.1021/bi400289e. Epub 2013 May 6.
Iron-protoporphyrin IX, or b heme, is utilized as such by a large number of proteins and enzymes. In some cases, notably the c-type cytochromes, this group undergoes a posttranslational covalent attachment to the polypeptide chain, which adjusts the physicochemical properties of the holoprotein. The hemoglobin from the cyanobacterium Synechocystis sp. PCC 6803 (GlbN), contrary to the archetypical hemoglobin, modifies its b heme covalently. The posttranslational modification links His117, a residue that does not coordinate the iron, to the porphyrin 2-vinyl substituent and forms a hybrid b/c heme. The reaction is an electrophilic addition that occurs spontaneously in the ferrous state of the protein. This apparently facile type of heme modification has been observed in only two cyanobacterial GlbNs. To explore the determinants of the reaction, we examined the behavior of Synechocystis GlbN variants containing a histidine at position 79, which is buried against the porphyrin 4-vinyl substituent. We found that L79H/H117A GlbN bound the heme weakly but nevertheless formed a cross-link between His79 Nε2 and the heme 4-Cα. In addition to this linkage, the single variant L79H GlbN also formed the native His117-2-Cα bond yielding an unprecedented bis-alkylated protein adduct. The ability to engineer the doubly modified protein indicates that the histidine-heme modification in GlbN is robust and could be engineered in different local environments. The rarity of the histidine linkage in natural proteins, despite the ease of reaction, is proposed to stem from multiple sources of negative selection.
铁原卟啉 IX,或 b 血红素,被大量的蛋白质和酶用作这样的物质。在某些情况下,特别是 c 型细胞色素,这个基团经历了翻译后共价连接到多肽链上,这调整了全蛋白的物理化学性质。来自集胞藻 PCC 6803(GlbN)的血红蛋白与典型的血红蛋白不同,共价修饰其 b 血红素。翻译后修饰将不配位铁的残基 His117 与卟啉 2-乙烯基取代基连接,并形成杂交 b/c 血红素。该反应是一种亲电加成反应,在蛋白质的亚铁状态下自发发生。这种显然容易的血红素修饰类型仅在两种蓝藻 GlbN 中观察到。为了探索反应的决定因素,我们研究了含有位于与卟啉 4-乙烯基取代基相对的位置的组氨酸的集胞藻 GlbN 变体的行为。我们发现 L79H/H117A GlbN 弱结合血红素,但仍然在 His79 Nε2 和血红素 4-Cα 之间形成交联。除了这种键合之外,单一变体 L79H GlbN 还形成了天然 His117-2-Cα 键,产生了前所未有的双烷基化蛋白质加合物。对双修饰蛋白进行工程改造的能力表明,GlbN 中的组氨酸-血红素修饰是稳健的,可以在不同的局部环境中进行工程改造。尽管反应容易,但天然蛋白质中组氨酸键的稀有性被认为源于多种负选择的来源。