School of Physics, Georgia Institute of Technology, Atlanta, GA, USA.
J Theor Biol. 2013 Sep 7;332:65-77. doi: 10.1016/j.jtbi.2013.04.011. Epub 2013 Apr 19.
Bacteria and their viruses (bacteriophages) coexist in natural environments forming complex infection networks. Recent empirical findings suggest that phage-bacteria infection networks often possess a nested structure such that there is a hierarchical relationship among who can infect whom. Here we consider how nested infection networks may affect phage and bacteria dynamics using a multi-type Lotka-Volterra framework with cross-infection. Analysis of similar models has, in the past, assumed simpler interaction structures as a first step towards tractability. We solve the proposed model, finding trade-off conditions on the life-history traits of both bacteria and viruses that allow coexistence in communities with nested infection networks. First, we find that bacterial growth rate should decrease with increasing defense against infection. Second, we find that the efficiency of viral infection should decrease with host range. Next, we establish a relationship between relative densities and the curvature of life history trade-offs. We compare and contrast the current findings to the "Kill-the-Winner" model of multi-species phage-bacteria communities. Finally, we discuss a suite of testable hypotheses stemming from the current model concerning relationships between infection range, life history traits and coexistence in complex phage-bacteria communities.
细菌及其病毒(噬菌体)在自然环境中共存,形成复杂的感染网络。最近的实证研究结果表明,噬菌体-细菌感染网络通常具有嵌套结构,即谁可以感染谁存在层次关系。在这里,我们考虑嵌套感染网络如何通过具有交叉感染的多型洛特卡-沃尔泰拉框架来影响噬菌体和细菌的动态。过去,对类似模型的分析假设了更简单的相互作用结构,作为可处理性的第一步。我们解决了所提出的模型,发现了细菌和病毒的生活史特征之间的权衡条件,这些条件允许在具有嵌套感染网络的群落中共存。首先,我们发现细菌的增长率应该随着对感染的防御能力的增加而降低。其次,我们发现病毒感染的效率应该随着宿主范围的增加而降低。接下来,我们建立了相对密度和生活史权衡的曲率之间的关系。我们将当前的研究结果与多物种噬菌体-细菌群落的“杀死胜利者”模型进行了比较和对比。最后,我们讨论了从当前模型中得出的一系列可测试的假设,这些假设涉及感染范围、生活史特征以及复杂噬菌体-细菌群落中的共存关系。