Instituto de Medicina Molecular, Faculdade de Medicina da Universidade de Lisboa, Av. Prof. Egas Moniz, Edifício Egas Moniz, 1649-028 Lisboa, Portugal.
J Mol Med (Berl). 2013 Aug;91(8):1013-23. doi: 10.1007/s00109-013-1022-4. Epub 2013 Apr 27.
Behçet's disease (BD) is a complex disease with genetic and environmental risk factors implicated in its etiology; however, its pathophysiology is poorly understood. To decipher BD's genetic underpinnings, we combined gene expression profiling with pathway analysis and association studies. We compared the gene expression profiles in peripheral blood mononuclear cells (PBMCs) of 15 patients and 14 matched controls using Affymetrix microarrays and found that the neuregulin signaling pathway was over-represented among the differentially expressed genes. The Epiregulin (EREG), Amphiregulin (AREG), and Neuregulin-1 (NRG1) genes of this pathway stand out as they are also among the top differentially expressed genes. Twelve haplotype tagging SNPs at the EREG-AREG locus and 15 SNPs in NRG1 found associated in at least one published BD genome-wide association study were tested for association with BD in a dataset of 976 Iranian patients and 839 controls. We found a novel association with BD for the rs6845297 SNP located downstream of EREG, and replicated three associations at NRG1 (rs4489285, rs383632, and rs1462891). Multifactor dimensionality reduction analysis indicated the existence of epistatic interactions between EREG and NRG1 variants. EREG-AREG and NRG1, which are members of the epidermal growth factor (EGF) family, seem to modulate BD susceptibility through main effects and gene-gene interactions. These association findings support a role for the EGF/ErbB signaling pathway in BD pathogenesis that warrants further investigation and highlight the importance of combining genetic and genomic approaches to dissect the genetic architecture of complex diseases.
贝切特病(BD)是一种复杂的疾病,其病因涉及遗传和环境风险因素;然而,其病理生理学尚未完全了解。为了解析 BD 的遗传基础,我们将基因表达谱分析与通路分析和关联研究相结合。我们使用 Affymetrix 微阵列比较了 15 名患者和 14 名匹配对照者外周血单核细胞(PBMC)中的基因表达谱,发现神经调节蛋白信号通路在差异表达基因中过度表达。该通路中的表皮调节素(EREG)、 Amphiregulin(AREG)和神经调节蛋白 1(NRG1)基因引人注目,因为它们也是差异表达基因中的佼佼者。在 EREG-AREG 基因座的 12 个单倍型标签 SNP 和 NRG1 中的 15 个在至少一项已发表的 BD 全基因组关联研究中发现与 BD 相关的 SNP 中进行了测试,以评估它们在 976 名伊朗患者和 839 名对照者的数据集与 BD 的相关性。我们发现了位于 EREG 下游的 rs6845297 SNP 与 BD 的新关联,并在 NRG1 中复制了三个关联(rs4489285、rs383632 和 rs1462891)。多因子降维分析表明 EREG 和 NRG1 变体之间存在上位性相互作用。表皮生长因子(EGF)家族的 EREG-AREG 和 NRG1 似乎通过主效和基因-基因相互作用来调节 BD 的易感性。这些关联发现支持 EGF/ErbB 信号通路在 BD 发病机制中的作用,值得进一步研究,并强调了结合遗传和基因组方法来剖析复杂疾病遗传结构的重要性。