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贝赫切特综合征:抗(CLEC12A、CLC)和促炎(IFI27)基因表达之间的失衡。

Behçet syndrome: The disturbed balance between anti- (CLEC12A, CLC) and proinflammatory (IFI27) gene expressions.

机构信息

Department of Internal Medicine, Division of General Internal Medicine, Başkent University Faculty of Medicine, Ankara, Turkey.

Department of Internal Medicine, Division of Rheumatology, Başkent University Faculty of Medicine, Ankara, Turkey.

出版信息

Immun Inflamm Dis. 2023 Apr;11(4):e836. doi: 10.1002/iid3.836.

Abstract

INTRODUCTION

Behçet syndrome (BS) is a chronic, multisystemic inflammatory condition with unanswered questions regarding its pathogenesis and rational therapeutics. A microarray-based comparative transcriptomic analysis was performed to elucidate the molecular mechanisms of BS and identify any potential therapeutic targets.

METHODS

Twenty-nine BS patients (B) and 15 age and sex-matched control subjects (C) were recruited. Patients were grouped as mucocutaneous (M), ocular (O), and vascular (V) according to their clinical phenotypes. GeneChip Human Genome U133 Plus 2.0 arrays were used for expression profiling on peripheral blood samples of the patients and the control subjects. Following documentation of the differentially expressed gene (DEG) sets, the data were further evaluated with bioinformatics analysis, visualization, and enrichment tools. Validation of the microarray data was performed using quantitative reverse transcriptase polymerase chain reaction.

RESULTS

When p ≤ 0.05 and fold change ≥2.0 were chosen, the following numbers of DEGs were obtained; B versus C: 28, M versus C: 20, O versus C: 8, V versus C: 555, M versus O: 6, M versus V: 324, O versus V: 142. Venn diagram analysis indicated only two genes, CLEC12A and IFI27, in the intersection of M versus C ∩ O versus C ∩ V versus C. Another noteworthy gene appeared as CLC in the DEG sets. Cluster analyses successfully clustered distinct clinical phenotypes of BS. While innate immunity-related processes were enriched in the M group, adaptive immunity-specific processes were significantly enriched in the O and V groups.

CONCLUSIONS

Distinct clinical phenotypes of BS patients displayed distinct expression profiles. In Turkish BS patients, expression differences regarding the genes CLEC12A, IFI27, and CLC seemed to be operative in the disease pathogenesis. Based on these findings, future research should consider the immunogenetic heterogeneity of BS clinical phenotypes. Two anti-inflammatory genes, namely CLEC12A and CLC, may be valuable as therapeutic targets and may also help design an experimental model in BS.

摘要

简介

贝切特综合征(BS)是一种慢性、多系统炎症性疾病,其发病机制和合理治疗仍存在许多未解之谜。本研究采用基于微阵列的比较转录组分析方法,以阐明 BS 的分子机制并确定任何潜在的治疗靶点。

方法

招募了 29 名 BS 患者(B 组)和 15 名年龄和性别匹配的对照受试者(C 组)。根据临床表型,将患者分为黏膜皮肤型(M)、眼型(O)和血管型(V)。使用 GeneChip Human Genome U133 Plus 2.0 微阵列对患者和对照受试者的外周血样本进行表达谱分析。在记录差异表达基因(DEG)集后,进一步使用生物信息学分析、可视化和富集工具对数据进行评估。使用定量逆转录聚合酶链反应(qRT-PCR)验证微阵列数据。

结果

当选择 p 值≤0.05 和倍数变化≥2.0 时,获得以下 DEG 数量:B 组与 C 组相比:28;M 组与 C 组相比:20;O 组与 C 组相比:8;V 组与 C 组相比:555;M 组与 O 组相比:6;M 组与 V 组相比:324;O 组与 V 组相比:142。Venn 图分析表明,M 组与 C 组、O 组与 C 组、V 组与 C 组的交集只有两个基因 CLEC12A 和 IFI27。另一个值得注意的基因 CLC 出现在 DEG 集中。聚类分析成功地对 BS 患者的不同临床表型进行了聚类。虽然 M 组富集了固有免疫相关过程,但 O 组和 V 组明显富集了适应性免疫特异性过程。

结论

BS 患者的不同临床表型显示出不同的表达谱。在土耳其 BS 患者中,CLEC12A、IFI27 和 CLC 等基因的表达差异似乎在疾病发病机制中起作用。基于这些发现,未来的研究应考虑 BS 临床表型的免疫遗传异质性。CLEC12A 和 CLC 这两个抗炎基因可能是有价值的治疗靶点,并有助于在 BS 中设计实验模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27c8/10091377/b3eca0bee650/IID3-11-e836-g002.jpg

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