Japan Collection of Microorganisms, RIKEN BioResource Center Wako-shi, Saitama, Japan ; Department of Molecular Biology, Tokyo University of Pharmacy and Life Science Hachioji, Tokyo, Japan.
Front Microbiol. 2013 Apr 17;4:85. doi: 10.3389/fmicb.2013.00085. eCollection 2013.
To directly access the sub-seafloor microbial communities, seafloor drilling has been done in a deep-sea hydrothermal field of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific. In the present study, crustal fluids were collected from the boreholes, and the bacterial and archaeal communities in the fluids were investigated by culture-independent molecular analysis based on 16S rRNA gene sequences. Bottom seawater, sands, rocks, sulfide mound, and chimneys were also collected around the boreholes and analyzed for comparisons. Comprehensive analysis revealed the characteristics of the microbial community composition in the crustal fluids. Phylotypes closely related to cultured species, e.g., Alteromonas, Halomonas, Marinobacter, were relatively abundant in some crustal fluid samples, whereas the phylotypes related to Pelagibacter and the SUP05-group were relatively abundant in the seawater samples. Phylotypes related to other uncultured environmental clones in Alphaproteobacteria and Gammaproteobacteria were relatively abundant in the sand, rock, sulfide mound, and chimney samples. Furthermore, comparative analysis with previous studies of the Suiyo Seamount crustal fluids indicates the change in the microbial community composition for 3 years. Our results provide novel insights into the characteristics of the microbial communities in crustal fluids beneath a deep-sea hydrothermal field.
为了直接获取海底微生物群落,人们在西太平洋伊豆-小笠原弧的骏河海山深海热液场进行了海底钻探。在本研究中,从钻孔中采集了地壳流体,并通过基于 16S rRNA 基因序列的非培养分子分析研究了流体中的细菌和古菌群落。还围绕钻孔采集了底层海水、沙子、岩石、硫化物丘和烟囱,并进行了分析比较。综合分析揭示了地壳流体中微生物群落组成的特征。某些地壳流体样本中相对丰富的与培养物种密切相关的菌群,如 Alteromonas、Halomonas、Marinobacter 等,而 Pelagibacter 和 SUP05 组相关的菌群在海水样本中相对丰富。在沙子、岩石、硫化物丘和烟囱样本中,与其他未培养的环境克隆相关的 Alphaproteobacteria 和 Gammaproteobacteria 的菌群相对丰富。此外,与骏河海山地壳流体的先前研究进行的比较分析表明,微生物群落组成在 3 年内发生了变化。我们的研究结果为深海热液场下方地壳流体中微生物群落的特征提供了新的见解。