Department of Biotechnology; Norwegian University of Science and Technology; Trondheim, Norway.
Bioengineered. 2013 Nov-Dec;4(6):431-4. doi: 10.4161/bioe.24703. Epub 2013 Apr 22.
Tools for strain engineering with predictable outcome are of crucial importance for the nascent field of synthetic biology. The success of combining different DNA biological parts is often restricted by poorly understood factors deriving from the complexity of the systems. We have previously identified variants for different regulatory elements of the expression cassette XylS/Pm. When such elements are combined they act in a manner consistent with their individual behavior, as long as they affect different functions, such as transcription and translation. Interestingly, sequence context does not seem to influence the final outcome significantly. Expression of reporter gene bla could be increased up to 75 times at the protein level by combining three variants in one cassette. For other tested reporter genes similar results were obtained, except that the stimulatory effect was quantitatively less. Combination of individually characterized DNA parts thus stands as suitable method to achieve a desired phenotype.
具有可预测结果的菌株工程工具对于新兴的合成生物学领域至关重要。将不同的 DNA 生物部分组合在一起的成功往往受到源于系统复杂性的理解不足的因素的限制。我们之前已经确定了表达盒 XylS/Pm 的不同调控元件的变体。只要它们影响不同的功能,例如转录和翻译,当这些元件组合在一起时,它们的行为就与其各自的行为一致。有趣的是,序列背景似乎并没有显著影响最终结果。通过在一个盒中组合三个变体,报告基因 bla 的蛋白水平表达可以增加多达 75 倍。对于其他测试的报告基因,也得到了类似的结果,只是刺激效果在数量上较小。因此,组合单独表征的 DNA 部分是实现所需表型的合适方法。