工程生物积木载体从生物积木部件。

Engineering BioBrick vectors from BioBrick parts.

机构信息

Department of Biological Engineering, MIT, 32 Vassar Street Rm 32-311, Cambridge, MA 02139, USA.

出版信息

J Biol Eng. 2008 Apr 14;2:5. doi: 10.1186/1754-1611-2-5.

Abstract

BACKGROUND

The underlying goal of synthetic biology is to make the process of engineering biological systems easier. Recent work has focused on defining and developing standard biological parts. The technical standard that has gained the most traction in the synthetic biology community is the BioBrick standard for physical composition of genetic parts. Parts that conform to the BioBrick assembly standard are BioBrick standard biological parts. To date, over 2,000 BioBrick parts have been contributed to, and are available from, the Registry of Standard Biological Parts.

RESULTS

Here we extended the same advantages of BioBrick standard biological parts to the plasmid-based vectors that are used to provide and propagate BioBrick parts. We developed a process for engineering BioBrick vectors from BioBrick parts. We designed a new set of BioBrick parts that encode many useful vector functions. We combined the new parts to make a BioBrick base vector that facilitates BioBrick vector construction. We demonstrated the utility of the process by constructing seven new BioBrick vectors. We also successfully used the resulting vectors to assemble and propagate other BioBrick standard biological parts.

CONCLUSION

We extended the principles of part reuse and standardization to BioBrick vectors. As a result, myriad new BioBrick vectors can be readily produced from all existing and newly designed BioBrick parts. We invite the synthetic biology community to (1) use the process to make and share new BioBrick vectors; (2) expand the current collection of BioBrick vector parts; and (3) characterize and improve the available collection of BioBrick vector parts.

摘要

背景

合成生物学的根本目标是使工程生物学系统的过程更加容易。最近的工作集中在定义和开发标准生物部件上。在合成生物学界获得最多关注的技术标准是用于遗传部件物理组成的 BioBrick 标准。符合 BioBrick 组装标准的部件是 BioBrick 标准生物部件。迄今为止,已有 2000 多个 BioBrick 部件被提交并可从标准生物部件注册中心获得。

结果

在这里,我们将 BioBrick 标准生物部件的相同优势扩展到用于提供和传播 BioBrick 部件的基于质粒的载体。我们开发了一种从 BioBrick 部件设计 BioBrick 载体的过程。我们设计了一组新的 BioBrick 部件,这些部件编码了许多有用的载体功能。我们将新部件组合在一起,制作了一个方便 BioBrick 载体构建的 BioBrick 基础载体。我们通过构建七个新的 BioBrick 载体证明了该过程的实用性。我们还成功地使用得到的载体来组装和传播其他 BioBrick 标准生物部件。

结论

我们将部件重用和标准化的原则扩展到了 BioBrick 载体。因此,无数新的 BioBrick 载体可以从所有现有的和新设计的 BioBrick 部件中快速生产。我们邀请合成生物学界(1)使用该过程制造和共享新的 BioBrick 载体;(2)扩展当前的 BioBrick 载体部件集合;(3)表征和改进现有的 BioBrick 载体部件集合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1908/2373286/cd0b7bea6e27/1754-1611-2-5-1.jpg

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