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光合作用膜上 LH2 环的最佳折叠对称性。

Optimal fold symmetry of LH2 rings on a photosynthetic membrane.

机构信息

Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

出版信息

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8537-42. doi: 10.1073/pnas.1218270110. Epub 2013 May 6.

Abstract

An intriguing observation of photosynthetic light-harvesting systems is the N-fold symmetry of light-harvesting complex 2 (LH2) of purple bacteria. We calculate the optimal rotational configuration of N-fold rings on a hexagonal lattice and establish two related mechanisms for the promotion of maximum excitation energy transfer (EET). (i) For certain fold numbers, there exist optimal basis cells with rotational symmetry, extendable to the entire lattice for the global optimization of the EET network. (ii) The type of basis cell can reduce or remove the frustration of EET rates across the photosynthetic network. We find that the existence of a basis cell and its type are directly related to the number of matching points S between the fold symmetry and the hexagonal lattice. The two complementary mechanisms provide selection criteria for the fold number and identify groups of consecutive numbers. Remarkably, one such group consists of the naturally occurring 8-, 9-, and 10-fold rings. By considering the inter-ring distance and EET rate, we demonstrate that this group can achieve minimal rotational sensitivity in addition to an optimal packing density, achieving robust and efficient EET. This corroborates our findings i and ii and, through their direct relation to S, suggests the design principle of matching the internal symmetry with the lattice order.

摘要

令人感兴趣的光合光捕获系统的一个观察结果是,紫色细菌的光捕获复合物 2(LH2)具有 N 重旋转对称性。我们计算了六方晶格上 N 重环的最佳旋转配置,并建立了两种相关的机制来促进最大激发能量转移(EET)。(i)对于某些折叠数,存在具有旋转对称性的最佳基元,可以扩展到整个晶格,以实现 EET 网络的全局优化。(ii)基元的类型可以减少或消除光合网络中 EET 速率的挫折。我们发现,基元的存在及其类型与折叠对称性与六方晶格之间的匹配点数 S 直接相关。这两种互补的机制为折叠数提供了选择标准,并确定了连续数的组。值得注意的是,这样的一组包括自然存在的 8、9 和 10 重环。通过考虑环间距离和 EET 速率,我们证明该组除了最佳堆积密度外,还可以实现最小的旋转灵敏度,从而实现稳健高效的 EET。这证实了我们的发现 i 和 ii,并通过它们与 S 的直接关系,表明了匹配内部对称性与晶格顺序的设计原则。

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Optimal fold symmetry of LH2 rings on a photosynthetic membrane.光合作用膜上 LH2 环的最佳折叠对称性。
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本文引用的文献

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Design principles of photosynthetic light-harvesting.光合作用光捕获的设计原则。
Faraday Discuss. 2012;155:27-41; discussion 103-14. doi: 10.1039/c1fd00078k.

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