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一种用于分析复杂蛋白质混合物的新型二维凝胶电泳系统:应用于大肠杆菌核糖体

A new two-dimensional gel electrophoresis system for the analysis of complex protein mixtures: application to the ribosome of E. coli.

作者信息

Knopf U C, Sommer A, Kenny J, Traut R R

出版信息

Mol Biol Rep. 1975 Mar;2(1):35-40. doi: 10.1007/BF00357295.

DOI:10.1007/BF00357295
PMID:236511
Abstract

A new method for two-dimensional polyacrylamide gel electrophoresis of proteins is described. The method, illustrated here by its application for the analysis of ribosomal proteins of E. coli, has a high resolving power. The proteins S15 and S16 can be resolved either following alkylation or under reducing conditions. This was not possible with urea gel systems previously employed. The method should be advantageous in the identification of the components of dimers formed with the reagent methyl 4-mercaptobutyrimidate. An additional advantage of the new method is that both dimensions are run at an acidic pH. For ribosomal proteins it is therefore unnecessary to either polymerize the protein sample in the middle of the first dimension disc gel or to electrophorese two samples with opposite polarity.

摘要

本文描述了一种蛋白质二维聚丙烯酰胺凝胶电泳的新方法。这里通过其在大肠杆菌核糖体蛋白分析中的应用举例说明该方法具有高分辨率。蛋白质S15和S16在烷基化后或还原条件下均可分离。这在以前使用的尿素凝胶系统中是不可能的。该方法在鉴定与试剂4-巯基丁酸甲酯形成的二聚体成分时应具有优势。新方法的另一个优点是两个维度均在酸性pH下进行。因此,对于核糖体蛋白,无需在第一维圆盘凝胶中间聚合蛋白质样品或电泳两个极性相反的样品。

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A new two-dimensional gel electrophoresis system for the analysis of complex protein mixtures: application to the ribosome of E. coli.一种用于分析复杂蛋白质混合物的新型二维凝胶电泳系统:应用于大肠杆菌核糖体
Mol Biol Rep. 1975 Mar;2(1):35-40. doi: 10.1007/BF00357295.
2
Identification of proteins at the subunit interface of the Escherichia coli ribosome by cross-linking with dimethyl 3,3'-dithiobis(propionimidate).通过与二甲基3,3'-二硫代双(丙基亚氨酸酯)交联鉴定大肠杆菌核糖体亚基界面处的蛋白质
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Ribosomal proteins. XIV. Isoelectric points of ribosomal proteins of E. coli as determined by two-dimensional polyacrylamide gel electrophoresis.核糖体蛋白质。十四。通过二维聚丙烯酰胺凝胶电泳测定的大肠杆菌核糖体蛋白质的等电点。
Anal Biochem. 1971 Sep;43(1):25-31. doi: 10.1016/0003-2697(71)90103-5.
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Extraction and isolation of individual ribosomal proteins from Escherichia coli.从大肠杆菌中提取和分离单个核糖体蛋白。
J Bacteriol. 1968 Aug;96(2):358-64. doi: 10.1128/jb.96.2.358-364.1968.
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Preoperative isolation of a reversible protein-protein crosslink generated in 50 S subunits of Escherichia coli ribosomes and identification of its components.大肠杆菌核糖体50 S亚基中产生的可逆蛋白质-蛋白质交联的术前分离及其成分鉴定。
Anal Biochem. 1987 Jul;164(1):23-30. doi: 10.1016/0003-2697(87)90361-7.
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An apparatus for one- and two-dimensional polyacrylamide gel electrophoresis and its use with ribosomal proteins.一种用于一维和二维聚丙烯酰胺凝胶电泳的装置及其与核糖体蛋白的联用
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Ribosomal proteins. XLIV. A simple procedure for prefractionation of proteins from Escherichia coli 70S ribosomes and from 30S and 50S subunits.核糖体蛋白。XLIV。一种从大肠杆菌70S核糖体以及30S和50S亚基中预分离蛋白质的简单方法。
Hoppe Seylers Z Physiol Chem. 1972 Dec;353(12):1899-906. doi: 10.1515/bchm2.1972.353.2.1899.
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The identification of the eukaryotic ribosomal proteins homologous with Escherichia coli proteins L7 and L12.与大肠杆菌蛋白质L7和L12同源的真核生物核糖体蛋白质的鉴定。
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Analysis of Escherichia coli ribosomal proteins by an improved two dimensional gel electrophoresis. I. Detection of four new proteins.通过改进的二维凝胶电泳分析大肠杆菌核糖体蛋白。I. 四种新蛋白的检测
J Biochem. 1986 Dec;100(6):1583-94. doi: 10.1093/oxfordjournals.jbchem.a121866.
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50-S subunit from Escherichia coli ribosomes. Isolation of active ribosomal proteins and protein complexes.来自大肠杆菌核糖体的50-S亚基。活性核糖体蛋白和蛋白复合物的分离。
Eur J Biochem. 1979 Oct;100(1):101-13. doi: 10.1111/j.1432-1033.1979.tb02038.x.

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Reconstruction of the smaller subparticle of rabbit ribosomes from core-particle and split-protein fractions.

本文引用的文献

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Enumeration of rabbit reticulocyte ribosomal proteins.兔网织红细胞核糖体蛋白的计数
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Two-dimensional polyacrylamide gel electrophoresis of animal ribosomal proteins based on charge inversion.基于电荷反转的动物核糖体蛋白二维聚丙烯酰胺凝胶电泳
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Resistance of the peptidyltransferase centre of rabbit ribosomes to attack by nucleases and proteinases.兔核糖体肽基转移酶中心对核酸酶和蛋白酶攻击的抗性。
Biochem J. 1980 Jul 15;190(1):199-214. doi: 10.1042/bj1900199.
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Protein synthesis by hybrid ribosomes reconstructed from rabbit reticulocyte ribosomal core-particles and amphibian or fungal split-proteins.由兔网织红细胞核糖体核心颗粒与两栖类或真菌类裂解蛋白重建的杂种核糖体进行的蛋白质合成。
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Characterization of mutants of Escherichia coli with an increased control of translation fidelity.对翻译保真度控制增强的大肠杆菌突变体的表征。
Mol Gen Genet. 1983;189(1):123-8. doi: 10.1007/BF00326064.
9
The conserved 900 stem/loop region in Escherichia coli 16S ribosomal RNA is not required for protein synthesis.大肠杆菌16S核糖体RNA中保守的900茎环区域对于蛋白质合成并非必需。
Nucleic Acids Res. 1989 Apr 11;17(7):2723-32. doi: 10.1093/nar/17.7.2723.
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Micro-scale two-dimensional polyacrylamide gell electrophoresis of ribosomal proteins.核糖体蛋白的微量二维聚丙烯酰胺凝胶电泳
Mol Gen Genet. 1976 Feb 27;144(1):1-9. doi: 10.1007/BF00277296.
核糖体蛋白。十二。通过二维凝胶电泳测定大肠杆菌小核糖体亚基和大核糖体亚基中的蛋白数量。
Proc Natl Acad Sci U S A. 1970 Nov;67(3):1276-82. doi: 10.1073/pnas.67.3.1276.
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Ribosomal proteins. VII. Two-dimensional polyacrylamide gel electrophoresis for fingerprinting of ribosomal proteins.核糖体蛋白。VII. 用于核糖体蛋白指纹图谱分析的二维聚丙烯酰胺凝胶电泳
Anal Biochem. 1970 Aug;36(2):401-12. doi: 10.1016/0003-2697(70)90376-3.
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The ribosomal proteins of Escherichia coli. I. Purification of the 30S ribosomal proteins.大肠杆菌的核糖体蛋白。I. 30S核糖体蛋白的纯化。
Biochemistry. 1969 Jul;8(7):2897-905. doi: 10.1021/bi00835a031.
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Two-dimensional polyacrylamide gel electrophoresis: an improved method for ribosomal proteins.二维聚丙烯酰胺凝胶电泳:一种用于核糖体蛋白的改进方法。
Anal Biochem. 1974 Jan;57(1):200-10. doi: 10.1016/0003-2697(74)90065-7.
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Diagonal polyacrylamide-dodecyl sulfate gel electrophoresis for the identification of ribosomal proteins crosslinked with methyl-4-mercaptobutyrimidate.
Proc Natl Acad Sci U S A. 1974 Oct;71(10):3946-50. doi: 10.1073/pnas.71.10.3946.
8
Sensitive separation procedure for Escherichia coli ribosomal proteins and the resolution of high-molecular-weight components.用于大肠杆菌核糖体蛋白的灵敏分离程序及高分子量组分的分离
Eur J Biochem. 1974 Jun 15;45(2):541-6. doi: 10.1111/j.1432-1033.1974.tb03579.x.
9
An apparatus for one- and two-dimensional polyacrylamide gel electrophoresis and its use with ribosomal proteins.一种用于一维和二维聚丙烯酰胺凝胶电泳的装置及其与核糖体蛋白的联用
Anal Biochem. 1974 Jan;57(1):274-86. doi: 10.1016/0003-2697(74)90073-6.
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Separation and radioautography of microgram quantities of ribosomal proteins by two-dimensional polyacrylamide gel electrophoresis.通过二维聚丙烯酰胺凝胶电泳对微克级核糖体蛋白进行分离和放射自显影。
FEBS Lett. 1973 Jan 15;29(2):177-80. doi: 10.1016/0014-5793(73)80555-1.