Microbiology, Institute of Biology II, University of Freiburg, Freiburg im Breisgau, Germany.
J Bacteriol. 2013 Jul;195(14):3193-200. doi: 10.1128/JB.00322-13. Epub 2013 May 10.
The strictly anaerobic Syntrophus aciditrophicus is a fermenting deltaproteobacterium that is able to degrade benzoate or crotonate in the presence and in the absence of a hydrogen-consuming partner. During growth in pure culture, both substrates are dismutated to acetate and cyclohexane carboxylate. In this work, the unknown enzymes involved in the late steps of cyclohexane carboxylate formation were studied. Using enzyme assays monitoring the oxidative direction, a cyclohex-1-ene-1-carboxyl-CoA (Ch1CoA)-forming cyclohexanecarboxyl-CoA (ChCoA) dehydrogenase was purified and characterized from S. aciditrophicus and after heterologous expression of its gene in Escherichia coli. In addition, a cyclohexa-1,5-diene-1-carboxyl-CoA (Ch1,5CoA)-forming Ch1CoA dehydrogenase was characterized after purification of the heterologously expressed gene. Both enzymes had a native molecular mass of 150 kDa and were composed of a single, 40- to 45-kDa subunit; both contained flavin adenine dinucleotide (FAD) as a cofactor. While the ChCoA dehydrogenase was competitively inhibited by Ch1CoA in the oxidative direction, Ch1CoA dehydrogenase further converted the product Ch1,5CoA to benzoyl-CoA. The results obtained suggest that Ch1,5CoA is a common intermediate in benzoate and crotonate fermentation that serves as an electron-accepting substrate for the two consecutively operating acyl-CoA dehydrogenases characterized in this work. In the case of benzoate fermentation, Ch1,5CoA is formed by a class II benzoyl-CoA reductase; in the case of crotonate fermentation, Ch1,5CoA is formed by reversing the reactions of the benzoyl-CoA degradation pathway that are also employed during the oxidative (degradative) branch of benzoate fermentation.
严格厌氧菌琥珀酸产甲烷菌是一种发酵的δ变形菌,能够在有和没有消耗氢的伙伴的情况下降解苯甲酸或巴豆酸。在纯培养物中生长时,这两种基质都被歧化为乙酸盐和环己烷羧酸盐。在这项工作中,研究了参与环己烷羧酸盐形成后期步骤的未知酶。使用监测氧化方向的酶测定法,从琥珀酸产甲烷菌中纯化并表征了一种环己-1-烯-1-羧基-CoA(Ch1CoA)形成环己烷羧酸-CoA(ChCoA)脱氢酶,并在大肠杆菌中异源表达其基因后进行了表征。此外,在纯化异源表达的基因后,还表征了一种环己-1,5-二烯-1-羧基-CoA(Ch1,5CoA)形成的 Ch1CoA 脱氢酶。两种酶的天然分子量均为 150 kDa,由单个 40 到 45 kDa 的亚基组成;两者都含有黄素腺嘌呤二核苷酸(FAD)作为辅因子。虽然 ChCoA 脱氢酶在氧化方向上被 Ch1CoA 竞争性抑制,但 Ch1CoA 脱氢酶进一步将产物 Ch1,5CoA 转化为苯甲酰-CoA。获得的结果表明,Ch1,5CoA 是苯甲酸和巴豆酸发酵中的共同中间产物,作为本工作中表征的两种连续作用的酰基辅酶 A 脱氢酶的电子接受底物。在苯甲酸发酵的情况下,Ch1,5CoA 由 II 类苯甲酰-CoA 还原酶形成;在巴豆酸发酵的情况下,Ch1,5CoA 由苯甲酰-CoA 降解途径的反应逆转形成,这些反应也在苯甲酸发酵的氧化(降解)分支中被利用。