Vanderkooi J M, Englander S W, Papp S, Wright W W, Owen C S
Department of Biochemistry and Biophysics, School of Medicine, University of Pennsylvania, Philadelphia 19104.
Proc Natl Acad Sci U S A. 1990 Jul;87(13):5099-103. doi: 10.1073/pnas.87.13.5099.
Ten proteins that span a wide range of phosphorescence lifetimes were examined for sensitivity to quenching by four agents of disparate chemical nature. The results show that quenching efficiency is relatively independent of the quencher and is highly correlated with depth of burial of the phosphorescent tryptophan. The bimolecular quenching rate constants (kq) measured for the different proteins, spanning 5 orders of magnitude in kq, are found to decrease exponentially with the distance (r) of the tryptophan in angstroms from the protein surface--i.e., kq = Aexp(-r/rho), where A contains a geometrical factor dependent on tryptophan burial and surface geometry [corrected]. Theoretical analysis shows that this behavior can be expected for an electron-exchange reaction between the buried tryptophans and quenchers in solution in the rapid diffusion limit. Therefore, the results obtained provide evidence for an exponential dependence of electron-transfer rate on distance in a protein environment and evaluate the distance parameter, rho, for electron transfer through the general protein matrix at 1.0 A. For a unimolecular donor-acceptor pair with ket = koexp(-r/rho), ko approximately 10(9) sec-1.
研究了十种具有广泛磷光寿命的蛋白质对四种化学性质不同的淬灭剂淬灭作用的敏感性。结果表明,淬灭效率相对独立于淬灭剂,并且与磷光色氨酸的埋藏深度高度相关。针对不同蛋白质测量的双分子淬灭速率常数(kq)跨越了5个数量级,发现其随色氨酸与蛋白质表面距离(r,单位为埃)呈指数下降——即kq = Aexp(-r/ρ),其中A包含一个取决于色氨酸埋藏情况和表面几何形状的几何因子[已修正]。理论分析表明,在快速扩散极限下,对于埋藏的色氨酸与溶液中的淬灭剂之间的电子交换反应,预期会出现这种行为。因此,所获得的结果为蛋白质环境中电子转移速率与距离的指数依赖性提供了证据,并评估了电子通过一般蛋白质基质转移的距离参数ρ为1.0埃。对于具有ket = koexp(-r/ρ)的单分子供体-受体对,ko约为10(9)秒-1。