Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Drug Metab Dispos. 2013 Aug;41(8):1538-47. doi: 10.1124/dmd.113.051672. Epub 2013 May 23.
Human liver gene regulatory (Bayesian) network analysis was previously used to identify a cytochrome P450 (P450) gene subnetwork with Aldo-keto reductase 1D1 (AKR1D1) as a key regulatory driver of this subnetwork. This study assessed the biologic importance of AKR1D1 [a key enzyme in the synthesis of bile acids, ligand activators of farnesoid X receptor (FXR), pregnane X receptor (PXR), and constitutive androstane receptor (CAR), known transcriptional regulators of P450s] to hepatic P450 expression. Overexpression of AKR1D1 in primary human hepatocytes led to increased expression of CYP3A4, CYP2C8, CYP2C9, CYP2C19, and CYP2B6. Conversely, AKR1D1 knockdown decreased expression of these P450s. We resequenced AKR1D1 from 98 donor livers and identified a 3'-untranslated region (UTR) (rs1872930) single nucleotide polymorphism (SNP) significantly associated with higher AKR1D1 mRNA expression. AKR1D1 3'-UTR-luciferase reporter studies showed that the variant allele resulted in higher luciferase activity, suggesting that the SNP increases AKR1D1 mRNA stability and/or translation efficiency. Consistent with AKR1D1's putative role as a driver of the P450 subnetwork, the AKR1D1 3'-UTR SNP was significantly associated with increased hepatic mRNA expression of multiple P450s (CYP3A4, CYP2C8, CYP2C9, CYP2C19, and CYP2B6) and CYP3A4, CYP2C8, CYP2C19, and CYP2B6 activities. After adjusting for multiple testing, the association remained significant for AKR1D1, CYP2C9, and CYP2C8 mRNA expression and CYP2C8 activity. These results provide new insights into the variation in expression and activity of P450s that can account for interindividual differences in drug metabolism/efficacy and adverse drug events. In conclusion, we provide the first experimental evidence supporting a role for AKR1D1 as a key genetic regulator of the P450 network.
先前,人类肝脏基因调控(贝叶斯)网络分析被用于鉴定细胞色素 P450(CYP)基因子网络,其中醛酮还原酶 1D1(AKR1D1)是该子网络的关键调节驱动因子。本研究评估了 AKR1D1(胆汁酸合成的关键酶,法尼醇 X 受体(FXR)、孕烷 X 受体(PXR)和组成型雄烷受体(CAR)的配体激活剂,已知是 CYP 的转录调节剂)对肝 CYP 表达的生物学重要性。在原代人肝细胞中过表达 AKR1D1 导致 CYP3A4、CYP2C8、CYP2C9、CYP2C19 和 CYP2B6 的表达增加。相反,AKR1D1 的敲低降低了这些 CYP 的表达。我们对 98 个供体肝脏的 AKR1D1 进行了重新测序,并鉴定出一个 3'非翻译区(UTR)(rs1872930)单核苷酸多态性(SNP)与 AKR1D1 mRNA 表达升高显著相关。AKR1D1 3'UTR-荧光素酶报告基因研究表明,变异等位基因导致更高的荧光素酶活性,提示该 SNP 增加了 AKR1D1 mRNA 的稳定性和/或翻译效率。与 AKR1D1 作为 CYP 子网络驱动因子的假定作用一致,AKR1D1 3'UTR SNP 与多个 CYP(CYP3A4、CYP2C8、CYP2C9、CYP2C19 和 CYP2B6)和 CYP3A4、CYP2C8、CYP2C19 和 CYP2B6 活性的肝 mRNA 表达增加显著相关。经多次检验调整后,AKR1D1、CYP2C9 和 CYP2C8 mRNA 表达和 CYP2C8 活性的相关性仍然显著。这些结果为 CYP 表达和活性的个体间差异提供了新的见解,这些差异可以解释药物代谢/疗效和药物不良事件的个体间差异。总之,我们提供了首个实验证据,支持 AKR1D1 作为 CYP 网络关键遗传调节因子的作用。
J Pharmacol Exp Ther. 2002-8
J Biochem Mol Toxicol. 2009
Drug Metab Dispos. 2001-3
Balkan J Med Genet. 2025-3-6
J Endocrinol. 2020-5
Biol Sex Differ. 2019-11-27
Pharmgenomics Pers Med. 2019-10-21
J Pers Med. 2017-12-1
J Pharmacol Exp Ther. 2009-11-24
J Gastroenterol Hepatol. 2009-6
Front Biosci (Landmark Ed). 2009-1-1
Mol Cell Endocrinol. 2009-3-25
Nat Rev Drug Discov. 2008-8