Suppr超能文献

氧化应激对胰岛素信号调节的计算建模

Computational modelling of the regulation of Insulin signalling by oxidative stress.

作者信息

Smith Graham R, Shanley Daryl P

机构信息

Centre for Integrated Systems Biology of Ageing & Nutrition (CISBAN), Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne NE4 5PL, UK.

出版信息

BMC Syst Biol. 2013 May 24;7:41. doi: 10.1186/1752-0509-7-41.

Abstract

BACKGROUND

Existing models of insulin signalling focus on short term dynamics, rather than the longer term dynamics necessary to understand many physiologically relevant behaviours. We have developed a model of insulin signalling in rodent adipocytes that includes both transcriptional feedback through the Forkhead box type O (FOXO) transcription factor, and interaction with oxidative stress, in addition to the core pathway. In the model Reactive Oxygen Species are both generated endogenously and can be applied externally. They regulate signalling though inhibition of phosphatases and induction of the activity of Stress Activated Protein Kinases, which themselves modulate feedbacks to insulin signalling and FOXO.

RESULTS

Insulin and oxidative stress combined produce a lower degree of activation of insulin signalling than insulin alone. Fasting (nutrient withdrawal) and weak oxidative stress upregulate antioxidant defences while stronger oxidative stress leads to a short term activation of insulin signalling but if prolonged can have other effects including degradation of the insulin receptor substrate (IRS1) and FOXO. At high insulin the protective effect of moderate oxidative stress may disappear.

CONCLUSION

Our model is consistent with a wide range of experimental data, some of which is difficult to explain. Oxidative stress can have effects that are both up- and down-regulatory on insulin signalling. Our model therefore shows the complexity of the interaction between the two pathways and highlights the need for such integrated computational models to give insight into the dysregulation of insulin signalling along with more data at the individual level.A complete SBML model file can be downloaded from BIOMODELS (https://www.ebi.ac.uk/biomodels-main) with unique identifier MODEL1212210000.Other files and scripts are available as additional files with this journal article and can be downloaded from https://github.com/graham1034/Smith2012_insulin_signalling.

摘要

背景

现有的胰岛素信号模型侧重于短期动态变化,而非理解许多生理相关行为所需的长期动态变化。我们构建了一个啮齿动物脂肪细胞中的胰岛素信号模型,该模型除了核心通路外,还包括通过叉头框O型(FOXO)转录因子的转录反馈以及与氧化应激的相互作用。在该模型中,活性氧既可以内源性产生,也可以外部施加。它们通过抑制磷酸酶和诱导应激激活蛋白激酶的活性来调节信号传导,而应激激活蛋白激酶本身又会调节对胰岛素信号和FOXO的反馈。

结果

胰岛素和氧化应激共同作用时,产生的胰岛素信号激活程度低于单独使用胰岛素时。禁食(营养剥夺)和弱氧化应激会上调抗氧化防御,而较强的氧化应激会导致胰岛素信号的短期激活,但如果持续时间过长,可能会产生其他影响,包括胰岛素受体底物(IRS1)和FOXO的降解。在高胰岛素水平下,适度氧化应激的保护作用可能消失。

结论

我们的模型与广泛的实验数据一致,其中一些数据难以解释。氧化应激对胰岛素信号传导既有上调作用,也有下调作用。因此,我们的模型展示了这两条通路之间相互作用的复杂性,并强调了需要这种综合计算模型来深入了解胰岛素信号失调以及个体水平上更多的数据。完整的SBML模型文件可从生物模型数据库(https://www.ebi.ac.uk/biomodels-main)下载,唯一标识符为MODEL1212210000。其他文件和脚本可作为本期刊文章的附加文件获取,可从https://github.com/graham1034/Smith2012_insulin_signalling下载。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ca5/3668293/0d45a6095928/1752-0509-7-41-1.jpg

相似文献

1
Computational modelling of the regulation of Insulin signalling by oxidative stress.
BMC Syst Biol. 2013 May 24;7:41. doi: 10.1186/1752-0509-7-41.
2
Linking Alzheimer's disease to insulin resistance: the FoxO response to oxidative stress.
Mol Psychiatry. 2010 Nov;15(11):1046-52. doi: 10.1038/mp.2010.17.
3
Should I stay or should I go: beta-catenin decides under stress.
Biochim Biophys Acta. 2009 Dec;1796(2):63-74. doi: 10.1016/j.bbcan.2009.02.002. Epub 2009 Mar 4.
4
The reciprocal stability of FOXO1 and IRS2 creates a regulatory circuit that controls insulin signaling.
Mol Endocrinol. 2006 Dec;20(12):3389-99. doi: 10.1210/me.2006-0092. Epub 2006 Aug 17.
6
A rule-based model of insulin signalling pathway.
BMC Syst Biol. 2016 Jun 1;10(1):38. doi: 10.1186/s12918-016-0281-4.
7
High uric acid directly inhibits insulin signalling and induces insulin resistance.
Biochem Biophys Res Commun. 2014 May 16;447(4):707-14. doi: 10.1016/j.bbrc.2014.04.080. Epub 2014 Apr 21.
8
Redox regulation of FoxO transcription factors.
Redox Biol. 2015 Dec;6:51-72. doi: 10.1016/j.redox.2015.06.019. Epub 2015 Jul 3.
9
FoxO feedback control of basal IRS-2 expression in pancreatic β-cells is distinct from that in hepatocytes.
Diabetes. 2011 Nov;60(11):2883-91. doi: 10.2337/db11-0340. Epub 2011 Sep 20.
10
Endocannabinoids, FOXO and the metabolic syndrome: redox, function and tipping point--the view from two systems.
Immunobiology. 2010 Aug;215(8):617-28. doi: 10.1016/j.imbio.2009.03.005. Epub 2009 May 19.

引用本文的文献

1
The Nrf2 Pathway Alleviates Overloading Force-Induced TMJ Degeneration by Downregulating Oxidative Stress Reactions.
J Inflamm Res. 2023 Nov 27;16:5601-5612. doi: 10.2147/JIR.S434799. eCollection 2023.
2
Approaches In Carcinogenicity Hazard Assessment: Current Status and Future Needs.
Comput Toxicol. 2021 Nov;20. doi: 10.1016/j.comtox.2021.100191. Epub 2021 Sep 23.
3
Computational Models on Pathological Redox Signalling Driven by Pregnancy: A Review.
Antioxidants (Basel). 2022 Mar 18;11(3):585. doi: 10.3390/antiox11030585.
4
Finding new edges: systems approaches to MTOR signaling.
Biochem Soc Trans. 2021 Feb 26;49(1):41-54. doi: 10.1042/BST20190730.
6
Benchmarking optimization methods for parameter estimation in large kinetic models.
Bioinformatics. 2019 Mar 1;35(5):830-838. doi: 10.1093/bioinformatics/bty736.
7
Computational Modeling in Liver Surgery.
Front Physiol. 2017 Nov 14;8:906. doi: 10.3389/fphys.2017.00906. eCollection 2017.
8
A Tale of Two Concepts: Harmonizing the Free Radical and Antagonistic Pleiotropy Theories of Aging.
Antioxid Redox Signal. 2018 Oct 1;29(10):1003-1017. doi: 10.1089/ars.2017.7105. Epub 2017 Oct 17.
9
Systems modelling ageing: from single senescent cells to simple multi-cellular models.
Essays Biochem. 2017 Jul 11;61(3):369-377. doi: 10.1042/EBC20160087. Print 2017 Jul 15.
10
Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks.
PLoS Comput Biol. 2017 Jan 23;13(1):e1005331. doi: 10.1371/journal.pcbi.1005331. eCollection 2017 Jan.

本文引用的文献

1
Systems modelling of NHEJ reveals the importance of redox regulation of Ku70/80 in the dynamics of dna damage foci.
PLoS One. 2013;8(2):e55190. doi: 10.1371/journal.pone.0055190. Epub 2013 Feb 6.
3
PaxDb, a database of protein abundance averages across all three domains of life.
Mol Cell Proteomics. 2012 Aug;11(8):492-500. doi: 10.1074/mcp.O111.014704. Epub 2012 Apr 24.
4
A dynamic network model of mTOR signaling reveals TSC-independent mTORC2 regulation.
Sci Signal. 2012 Mar 27;5(217):ra25. doi: 10.1126/scisignal.2002469.
6
A systems biological analysis links ROS metabolism to mitochondrial protein quality control.
Mech Ageing Dev. 2012 May;133(5):331-7. doi: 10.1016/j.mad.2012.03.008. Epub 2012 Mar 17.
7
Modelling the role of the Hsp70/Hsp90 system in the maintenance of protein homeostasis.
PLoS One. 2011;6(7):e22038. doi: 10.1371/journal.pone.0022038. Epub 2011 Jul 14.
8
A hierarchical whole-body modeling approach elucidates the link between in Vitro insulin signaling and in Vivo glucose homeostasis.
J Biol Chem. 2011 Jul 22;286(29):26028-41. doi: 10.1074/jbc.M110.188987. Epub 2011 May 13.
9
The plate half-full: status of research on the mechanisms of dietary restriction in Drosophila melanogaster.
Exp Gerontol. 2011 May;46(5):363-8. doi: 10.1016/j.exger.2010.12.002. Epub 2010 Dec 25.
10
Reactive oxygen species and insulin resistance: the good, the bad and the ugly.
Trends Pharmacol Sci. 2011 Feb;32(2):82-9. doi: 10.1016/j.tips.2010.11.006. Epub 2010 Dec 14.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验