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山杨中的性连锁区对应于三叶杨第 19 号染色体上约两百万碱基对的着丝粒周围区域。

The sex-linked region in Populus tremuloides Turesson 141 corresponds to a pericentromeric region of about two million base pairs on P. trichocarpa chromosome 19.

机构信息

Department of Genome Research, Thuenen-Institute of Forest Genetics, Grosshansdorf, Germany.

出版信息

Plant Biol (Stuttg). 2014 Mar;16(2):411-8. doi: 10.1111/plb.12048. Epub 2013 May 24.

Abstract

In the dioecious genus Populus, sex determination has been located to chromosome 19. However, despite a high degree of genome collinearity, various Populus species seem to differ with regard to the location of the sex-determining region on the respective chromosome and the apparent heterogametic sex. In this study, the boundaries of the recombination-suppressed, sex-linked region of the male P. tremuloides clone Turesson 141 were localised by genetic mapping using new SNP and InDel markers. The respective region seems to be located in a pericentromeric position. The corresponding P. trichocarpa genome region spans about two million bp and comprises 65 gene loci, which were bioinformatically evaluated for their potential as candidate genes for sex determination. Three putative transcription factor genes and four genes that are potentially involved in flower development processes, e.g. meristem transition from the vegetative to the reproductive phase, were identified. Populus tremuloides sequence data of the sex-linked region is required for a final search for candidate genes.

摘要

在雌雄异株的杨属中,性别决定已被定位到第 19 号染色体。然而,尽管基因组高度同源,但不同的杨树种似乎在性别决定区域在各自染色体上的位置以及明显的异型性染色体上存在差异。在这项研究中,通过使用新的 SNP 和 InDel 标记进行遗传作图,定位了雄性 P. tremuloides 克隆 Turesson 141 的重组抑制、性连锁区域的边界。相应的区域似乎位于着丝粒周围。相应的 P. trichocarpa 基因组区域跨度约为两百万个碱基对,包含 65 个基因座,这些基因座通过生物信息学评估,作为性别决定的候选基因。鉴定出了三个可能的转录因子基因和四个可能参与花发育过程的基因,例如从营养期向生殖期的分生组织过渡。需要 P. tremuloides 性连锁区域的序列数据来最终搜索候选基因。

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