Institute of Agricultural and Environmental Chemistry, Universitá Cattolica del Sacro Cuore, Piacenza, Italy.
FEMS Microbiol Ecol. 2013 Nov;86(2):172-84. doi: 10.1111/1574-6941.12150. Epub 2013 Jun 19.
The Po river plain lowland springs represent unique paradigms of managed environments. Their current locations used to be swamps that were drained 6-7 centuries ago, and they have been in constant use ever since. Our aims were to identify the effects of land use on the microbial communities of these soils, look for associated diversity drivers, and assess the applicability of ecology theories with respect to identified patterns. We screened the microbial diversity across a land use transect via high-throughput sequencing of partial 16S rrRNA gene amplicons. Land use had a major effect on soil properties and microbial community structures. Total organic carbon and pH were major diversity drivers for Bacteria, and pH was important for Archaea. We identified the potential contribution of soil amendments to the indigenous microbial communities, and also gained insights into potential roles of taxa in the organic carbon turnover. Verrucomicrobia coincided with the higher values of the recalcitrant organic carbon. Actinobacteria and Acidobacteria correlated with the more labile organic carbon. Finally, the higher diversity found in the soils less enzymatically active and relatively poorer in nutrients, may be explained to an extent by niche-based theories such as the resource heterogeneity hypothesis and Connell's intermediate disturbance hypothesis.
波河平原低地泉是人为管理环境的独特范例。它们现在的位置曾经是六七百年前排干的沼泽地,从那时起就一直在持续使用。我们的目的是确定土地利用对这些土壤中微生物群落的影响,寻找相关的多样性驱动因素,并评估针对所确定模式的生态学理论的适用性。我们通过高通量测序部分 16S rrRNA 基因扩增子,在土地利用梯度上筛选了微生物多样性。土地利用对土壤性质和微生物群落结构有重大影响。总有机碳和 pH 是细菌多样性的主要驱动因素,而 pH 对古菌也很重要。我们确定了土壤改良剂对本地微生物群落的潜在贡献,还深入了解了一些分类群在有机碳转化中的潜在作用。厚壁菌门与更难分解的有机碳的较高值相对应。放线菌门和酸杆菌门与更易分解的有机碳相关。最后,在酶活性较低且相对缺乏营养的土壤中发现的更高多样性,可以在一定程度上用基于生态位的理论来解释,如资源异质性假说和康奈尔的中度干扰假说。