Department of Mathematics and Statistics, Ohio Northern University, Ada, OH 45810, USA.
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W15-21. doi: 10.1093/nar/gkt417. Epub 2013 May 28.
The R3D Align web server provides online access to 'RNA 3D Align' (R3D Align), a method for producing accurate nucleotide-level structural alignments of RNA 3D structures. The web server provides a streamlined and intuitive interface, input data validation and output that is more extensive and easier to read and interpret than related servers. The R3D Align web server offers a unique Gallery of Featured Alignments, providing immediate access to pre-computed alignments of large RNA 3D structures, including all ribosomal RNAs, as well as guidance on effective use of the server and interpretation of the output. By accessing the non-redundant lists of RNA 3D structures provided by the Bowling Green State University RNA group, R3D Align connects users to structure files in the same equivalence class and the best-modeled representative structure from each group. The R3D Align web server is freely accessible at http://rna.bgsu.edu/r3dalign/.
R3D Align 网络服务器提供对“RNA 3D 对齐”（R3D Align）的在线访问，这是一种生成 RNA 3D 结构的精确核苷酸水平结构对齐的方法。该网络服务器提供了一个简化且直观的界面，输入数据验证和输出比相关服务器更广泛、更易于阅读和解释。R3D Align 网络服务器提供了一个独特的精选对齐图库，可直接访问大型 RNA 3D 结构的预计算对齐，包括所有核糖体 RNA，并提供有关有效使用服务器和解释输出的指导。通过访问 Bowling Green State University RNA 小组提供的非冗余 RNA 3D 结构列表，R3D Align 将用户连接到同一等价类的结构文件和每个组中建模最佳的代表结构。R3D Align 网络服务器可免费访问，网址为 http://rna.bgsu.edu/r3dalign/。
