Department of Chemistry and Chemical Biology, Center for Integrative Proteomics Research, Rutgers, the State University of New Jersey, 174 Frelinghuysen Road, Piscataway, NJ 08854-8076, USA, Department of Chemistry and Center for Biomolecular Sciences, Bowling Green State University, Bowling Green, OH 43403, USA and Department of Mathematics and Statistics, Bowling Green State University, Bowling Green, OH 43403, USA.
Nucleic Acids Res. 2014 Jan;42(Database issue):D114-22. doi: 10.1093/nar/gkt980. Epub 2013 Oct 31.
The Nucleic Acid Database (NDB) (http://ndbserver.rutgers.edu) is a web portal providing access to information about 3D nucleic acid structures and their complexes. In addition to primary data, the NDB contains derived geometric data, classifications of structures and motifs, standards for describing nucleic acid features, as well as tools and software for the analysis of nucleic acids. A variety of search capabilities are available, as are many different types of reports. This article describes the recent redesign of the NDB Web site with special emphasis on new RNA-derived data and annotations and their implementation and integration into the search capabilities.
核酸数据库(NDB)(http://ndbserver.rutgers.edu)是一个提供 3D 核酸结构及其复合物信息访问的网络门户。除了原始数据外,NDB 还包含衍生的几何数据、结构和模体的分类、描述核酸特征的标准,以及用于分析核酸的工具和软件。提供了多种搜索功能,以及许多不同类型的报告。本文描述了 NDB 网站的最新重新设计,特别强调了新的 RNA 衍生数据和注释及其实现以及与搜索功能的集成。