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鲍曼不动杆菌二氢吡啶二羧酸还原酶的克隆、表达、结晶及初步结构研究

Cloning, expression, crystallization and preliminary structural studies of dihydrodipicolinate reductase from Acinetobacter baumannii.

作者信息

Kaushik Sanket, Singh Avinash, Sinha Mau, Kaur Punit, Sharma Sujata, Singh Tej P

机构信息

Department of Biophysics, All India Institute of Medical Sciences, New Delhi 110 029, India.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jun;69(Pt 6):653-6. doi: 10.1107/S1744309113011214. Epub 2013 May 24.

DOI:10.1107/S1744309113011214
PMID:23722845
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3668586/
Abstract

Acinetobacter baumannii is a virulent pathogenic bacterium that is resistant to most currently available antibiotics. Therefore, the design of drugs for the treatment of infections caused by A. baumannii is urgently required. Dihydrodipicolinate reductase (DHDPR) is an important enzyme which is involved in the biosynthetic pathway that leads to the production of L-lysine in bacteria. In order to design potent inhibitors against this enzyme, its detailed three-dimensional structure is required. DHDPR from A. baumannii (AbDHDPR) has been cloned, expressed, purified and crystallized. Here, the preliminary X-ray crystallographic data of AbDHDPR are reported. The crystals were grown using the hanging-drop vapour-diffusion method with PEG 3350 as the precipitating agent The crystals belonged to the orthorhombic space group P222, with unit-cell parameters a = 80.0, b = 100.8, c = 147.6 Å, and contained four molecules in the asymmetric unit. The complete structure determination of AbDHDPR is in progress.

摘要

鲍曼不动杆菌是一种毒性很强的病原菌,对目前大多数可用抗生素具有抗性。因此,迫切需要设计用于治疗由鲍曼不动杆菌引起的感染的药物。二氢吡啶二羧酸还原酶(DHDPR)是一种重要的酶,参与细菌中导致L-赖氨酸产生的生物合成途径。为了设计针对该酶的有效抑制剂,需要其详细的三维结构。来自鲍曼不动杆菌的DHDPR(AbDHDPR)已被克隆、表达、纯化和结晶。在此,报道了AbDHDPR的初步X射线晶体学数据。晶体采用悬滴气相扩散法,以聚乙二醇3350作为沉淀剂生长。晶体属于正交晶系空间群P222,晶胞参数a = 80.0,b = 100.8,c = 147.6 Å,不对称单元中包含四个分子。AbDHDPR的完整结构测定正在进行中。

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Structure and nucleotide specificity of Staphylococcus aureus dihydrodipicolinate reductase (DapB).金黄色葡萄球菌二氢二吡啶羧酸还原酶(DapB)的结构与核苷酸特异性。
FEBS Lett. 2011 Aug 19;585(16):2561-7. doi: 10.1016/j.febslet.2011.07.021. Epub 2011 Jul 26.
3
Acinetobacter: an old friend, but a new enemy.不动杆菌:一个老相识,却是新敌人。
J Hosp Infect. 2009 Dec;73(4):355-63. doi: 10.1016/j.jhin.2009.03.032. Epub 2009 Aug 22.
4
Characterization of dihydrodipicolinate reductase from Thermotoga maritima reveals evolution of substrate binding kinetics.海栖热袍菌二氢二吡啶甲酸还原酶的特性揭示了底物结合动力学的演变。
J Biochem. 2008 May;143(5):617-23. doi: 10.1093/jb/mvn012. Epub 2008 Feb 4.
5
An increasing threat in hospitals: multidrug-resistant Acinetobacter baumannii.医院中日益严重的威胁:多重耐药鲍曼不动杆菌。
Nat Rev Microbiol. 2007 Dec;5(12):939-51. doi: 10.1038/nrmicro1789.
6
Identification of Acinetobacter baumannii by detection of the blaOXA-51-like carbapenemase gene intrinsic to this species.通过检测鲍曼不动杆菌中固有的blaOXA - 51样碳青霉烯酶基因来鉴定鲍曼不动杆菌。
J Clin Microbiol. 2006 Aug;44(8):2974-6. doi: 10.1128/JCM.01021-06.
7
The three-dimensional structures of the Mycobacterium tuberculosis dihydrodipicolinate reductase-NADH-2,6-PDC and -NADPH-2,6-PDC complexes. Structural and mutagenic analysis of relaxed nucleotide specificity.结核分枝杆菌二氢二吡啶甲酸还原酶-NADH-2,6-PDC和-NADPH-2,6-PDC复合物的三维结构。宽松核苷酸特异性的结构和诱变分析。
Biochemistry. 2003 Sep 16;42(36):10644-50. doi: 10.1021/bi030044v.
8
The epidemiology of multidrug-resistant Acinetobacter baumannii: does the community represent a reservoir?多重耐药鲍曼不动杆菌的流行病学:社区是否为一个储存库?
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9
Hospital-acquired infections following the 1999 Marmara earthquake.1999年马尔马拉地震后的医院获得性感染
J Hosp Infect. 2002 May;51(1):47-51. doi: 10.1053/jhin.2002.1205.
10
Detection of carbapenemase-producing Acinetobacter baumannii in a hospital.医院中产碳青霉烯酶鲍曼不动杆菌的检测
J Clin Microbiol. 2000 Feb;38(2):526-9. doi: 10.1128/JCM.38.2.526-529.2000.