• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单壁碳化硅纳米管在水中的分子动力学模拟。

Molecular dynamics simulation of single-walled silicon carbide nanotubes immersed in water.

机构信息

Department of Physical Chemistry, Tarbiat Modares University, P.O. Box 14115-117, Tehran, Iran.

出版信息

J Mol Graph Model. 2013 Jul;44:33-43. doi: 10.1016/j.jmgm.2013.04.012. Epub 2013 May 14.

DOI:10.1016/j.jmgm.2013.04.012
PMID:23732304
Abstract

The structure and dynamics of water confined in single-walled silicon carbon nanotubes (SWSiCNTs) are investigated using molecular dynamics (MD) simulations. The density of water inside SWSiCNTs is reported, and an equation is suggested to predict the density of water inside SWSiCNTs. Interestingly, the water diffusion coefficients (D) here are larger compared with those in SWCNTs and single-walled boron-nitride nanotubes (SWBNNTs). Furthermore, water inside zigzag SWCNTs has a lower diffusion coefficient than water inside armchair SWCNTs. A thorough analysis of the density profiles, hydrogen bonding, and water molecule orientation inside SWSiCNTs is presented to explore the mechanism behind the diffusive behavior of water observed here. It is shown here, by mean square displacement (MSD) analysis, that water molecules inside SWSiCNTs diffuse with a ballistic motion mechanism for up to 500ps. Additionally it is confirmed here for the first time that water molecules confined in the SWSiCNTs with diameters of less than 10Å obey the single-file diffusion mechanism at time scales in excess of 500ps. The orientation of water molecules inside SWSiCNTs could be a good explanation for the difference between the diffusion coefficient in (6,6) and (10,0) SWSiCNTs. Finally, a PMF analysis explains the difficulty of water entrance into SWSiCNTs and also the different water self-diffusion inside armchair and zigzag SWSiCNTs. These results are motivating reasons to use SWSiCNTs in nanoscale biochannels, for instance, in drug-delivery applications.

摘要

采用分子动力学(MD)模拟研究了单壁硅碳纳米管(SWSiCNTs)中受限水的结构和动力学。报道了 SWSiCNTs 内水的密度,并提出了一个预测 SWSiCNTs 内水密度的方程。有趣的是,这里的水扩散系数(D)比 SWCNTs 和单壁氮化硼纳米管(SWBNNTs)中的大。此外,锯齿形 SWCNTs 内的水扩散系数低于扶手椅形 SWCNTs 内的水。通过对 SWSiCNTs 内密度分布、氢键和水分子取向的深入分析,探讨了观察到的水扩散行为的机制。通过均方根位移(MSD)分析表明,SWSiCNTs 内的水分子在长达 500ps 的时间内以弹道运动机制扩散。此外,首次在这里证实,直径小于 10Å 的 SWSiCNTs 中受限的水分子在超过 500ps 的时间尺度上遵循单分子扩散机制。SWSiCNTs 内水分子的取向可以很好地解释(6,6)和(10,0)SWSiCNTs 中扩散系数的差异。最后,PMF 分析解释了水进入 SWSiCNTs 的困难以及扶手椅形和锯齿形 SWSiCNTs 内水自扩散的不同。这些结果为在纳米尺度生物通道中使用 SWSiCNTs 提供了动机,例如在药物输送应用中。

相似文献

1
Molecular dynamics simulation of single-walled silicon carbide nanotubes immersed in water.单壁碳化硅纳米管在水中的分子动力学模拟。
J Mol Graph Model. 2013 Jul;44:33-43. doi: 10.1016/j.jmgm.2013.04.012. Epub 2013 May 14.
2
Separation based adsorption of ethanol-water mixture in azeotropic solution by single-walled carbon, boron-nitride and silicon-carbide nanotubes.单壁碳纳米管、氮化硼纳米管和碳化硅纳米管对共沸溶液中乙醇 - 水混合物的吸附分离
J Mol Graph Model. 2017 Aug;75:149-164. doi: 10.1016/j.jmgm.2017.05.004. Epub 2017 May 10.
3
Properties of ultrathin cholesterol and phospholipid layers surrounding silicon-carbide nanotube: MD simulations.围绕碳化硅纳米管的超薄胆固醇和磷脂层的特性:分子动力学模拟
Arch Biochem Biophys. 2015 Aug 15;580:22-30. doi: 10.1016/j.abb.2015.06.008. Epub 2015 Jun 23.
4
Phase transition study of confined water molecules inside carbon nanotubes: hierarchical multiscale method from molecular dynamics simulation to ab initio calculation.受限碳纳米管内水分子的相转变研究:从分子动力学模拟到从头计算的层次化多尺度方法。
J Mol Graph Model. 2012 Sep;38:40-9. doi: 10.1016/j.jmgm.2012.05.009. Epub 2012 Jun 9.
5
Single-file diffusion of confined water inside SWNTs: an NMR study.单分子层受限水在单壁碳纳米管中的扩散:NMR 研究。
ACS Nano. 2010 Mar 23;4(3):1687-95. doi: 10.1021/nn901554h.
6
Molecular dynamics simulation of salt rejection through silicon carbide nanotubes as a nanostructure membrane.通过碳化硅纳米管作为纳米结构膜进行盐分截留的分子动力学模拟。
J Mol Graph Model. 2017 Jan;71:176-183. doi: 10.1016/j.jmgm.2016.11.017. Epub 2016 Nov 30.
7
Molecular dynamics simulations of adsorption and diffusion of gases in silicon-carbide nanotubes.碳化硅纳米管中气体吸附和扩散的分子动力学模拟。
J Chem Phys. 2010 Jan 7;132(1):014310. doi: 10.1063/1.3284542.
8
Effect of quantum partial charges on the structure and dynamics of water in single-walled carbon nanotubes.量子部分电荷对单壁碳纳米管中水的结构和动力学的影响。
J Chem Phys. 2006 Sep 21;125(11):114701. doi: 10.1063/1.2338305.
9
Structure and dynamics of confined water inside narrow carbon nanotubes.窄碳纳米管内受限水的结构与动力学
J Nanosci Nanotechnol. 2007 Jun;7(6):1796-9. doi: 10.1166/jnn.2007.718.
10
Manipulating biomolecules with aqueous liquids confined within single-walled nanotubes.在单壁纳米管内的受限水溶液中对生物分子进行操控。
J Am Chem Soc. 2009 Mar 4;131(8):2840-5. doi: 10.1021/ja804586w.

引用本文的文献

1
Current Understanding of Water Properties inside Carbon Nanotubes.对碳纳米管内水性质的当前理解。
Nanomaterials (Basel). 2022 Jan 5;12(1):174. doi: 10.3390/nano12010174.
2
A Molecular Study on Drug Delivery System Based on Carbon Nanotube Compared to Silicon Carbide Nanotube for Encapsulation of Platinum-Based Anticancer Drug.基于碳纳米管与碳化硅纳米管的药物递送系统用于封装铂类抗癌药物的分子研究
Adv Pharm Bull. 2018 Mar;8(1):163-167. doi: 10.15171/apb.2018.020. Epub 2018 Mar 18.