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一种新型 T 型突出端可提高 PCR 产物的无酶克隆效率。

A novel T-type overhangs improve the enzyme-free cloning of PCR products.

机构信息

Key Laboratory of Non-coding RNA, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.

出版信息

Mol Biotechnol. 2013 Sep;55(1):10-6. doi: 10.1007/s12033-012-9597-5.

DOI:10.1007/s12033-012-9597-5
PMID:23733332
Abstract

PCR product cloning is the foundational technology for almost all fields in the life sciences. Numerous innovative methods have been designed during the past few decades. Enzyme-free cloning is the only one that avoids post-amplification enzymatic treatments, making the technique reliable and cost effective. However, the complementary staggered overhangs used in enzyme-free cloning tend to result in self-ligation of the vector under some circumstances. Here, we describe a "T-type" enzyme-free cloning method: instead of designing the complementary staggered overhangs used in conventional enzyme-free cloning, we create "T-type" overhangs that reduce the possibility of self-ligation and are more convenient for multi-vector cloning. In this study, we systematically optimize "T-type" enzyme-free cloning, compare its cloning background with that in conventional enzyme-free cloning, and demonstrate a promising application of this technique in multi-vector cloning. Our method simplifies post-amplification procedures and greatly reduces cost, offering a competitive option for PCR product cloning.

摘要

PCR 产物克隆是生命科学几乎所有领域的基础技术。在过去几十年中,设计了许多创新方法。无酶克隆是唯一一种避免扩增后酶处理的方法,使该技术可靠且具有成本效益。然而,无酶克隆中使用的互补交错突出端在某些情况下容易导致载体自身连接。在这里,我们描述了一种“T 型”无酶克隆方法:不是设计传统无酶克隆中使用的互补交错突出端,而是创建“T 型”突出端,从而降低自身连接的可能性,并且更便于多载体克隆。在这项研究中,我们系统地优化了“T 型”无酶克隆,比较了其与传统无酶克隆的克隆背景,并展示了该技术在多载体克隆中的有前途的应用。我们的方法简化了扩增后的步骤,大大降低了成本,为 PCR 产物克隆提供了一种有竞争力的选择。

相似文献

1
A novel T-type overhangs improve the enzyme-free cloning of PCR products.一种新型 T 型突出端可提高 PCR 产物的无酶克隆效率。
Mol Biotechnol. 2013 Sep;55(1):10-6. doi: 10.1007/s12033-012-9597-5.
2
Enzyme-free cloning: a rapid method to clone PCR products independent of vector restriction enzyme sites.无酶克隆:一种独立于载体限制性酶切位点克隆PCR产物的快速方法。
Nucleic Acids Res. 1999 Oct 1;27(19):e26. doi: 10.1093/nar/27.19.e26.
3
Rapid restriction enzyme-free cloning of PCR products: a high-throughput method applicable for library construction.PCR产物的快速无限制酶克隆:一种适用于文库构建的高通量方法。
PLoS One. 2014 Oct 31;9(10):e111538. doi: 10.1371/journal.pone.0111538. eCollection 2014.
4
A PCR-after-ligation method for cloning of multiple DNA inserts.PCR 连接后克隆多位点 DNA 片段的方法
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XcmI site-containing vector for direct cloning and in vitro transcription of PCR product.用于PCR产物直接克隆和体外转录的含XcmI位点载体。
Mol Biotechnol. 1999 Oct;12(3):281-3. doi: 10.1385/MB:12:3:281.
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Rapid and efficient cloning of Alu-PCR products using uracil DNA glycosylase.使用尿嘧啶DNA糖基化酶快速高效地克隆Alu-PCR产物
PCR Methods Appl. 1991 Nov;1(2):120-3. doi: 10.1101/gr.1.2.120.
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An efficient plasmid vector for expression cloning of large numbers of PCR fragments in Escherichia coli.一种用于在大肠杆菌中对大量PCR片段进行表达克隆的高效质粒载体。
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FastCloning: a highly simplified, purification-free, sequence- and ligation-independent PCR cloning method.FastCloning:一种高度简化、无需纯化、无需序列和连接的 PCR 克隆方法。
BMC Biotechnol. 2011 Oct 12;11:92. doi: 10.1186/1472-6750-11-92.

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AQUA Cloning: A Versatile and Simple Enzyme-Free Cloning Approach.AQUA克隆:一种通用且简单的无酶克隆方法。

本文引用的文献

1
Self-assembly cloning: a rapid construction method for recombinant molecules from multiple fragments.自组装克隆:一种从多个片段快速构建重组分子的方法。
Biotechniques. 2011 Jul;51(1):55-6. doi: 10.2144/000113705.
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Applications of the Restriction Free (RF) cloning procedure for molecular manipulations and protein expression.无限制(RF)克隆程序在分子操作和蛋白质表达中的应用。
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复杂基因文库和途径的环化聚合酶延伸克隆
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5
RF cloning: a restriction-free method for inserting target genes into plasmids.RF克隆:一种将目标基因插入质粒的无限制酶切方法。
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Nucleic Acids Res. 1999 Oct 1;27(19):e26. doi: 10.1093/nar/27.19.e26.
8
Hetero-stagger cloning: efficient and rapid cloning of PCR products.异源交错克隆:PCR产物的高效快速克隆
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9
Minimal length requirement of the single-stranded tails for ligation-independent cloning (LIC) of PCR products.用于PCR产物的不依赖连接酶克隆(LIC)的单链尾巴的最小长度要求。
PCR Methods Appl. 1994 Dec;4(3):172-7. doi: 10.1101/gr.4.3.172.
10
A restriction enzyme from Hemophilus influenzae. I. Purification and general properties.一种来自流感嗜血杆菌的限制性内切酶。I. 纯化及一般特性。
J Mol Biol. 1970 Jul 28;51(2):379-91. doi: 10.1016/0022-2836(70)90149-x.