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作为肾上腺素能 α-1 受体激动剂的苯乙胺类化合物的 logP 值的全球定量构效关系建模。

Global QSAR modeling of logP values of phenethylamines acting as adrenergic alpha-1 receptor agonists.

机构信息

Department of Pharmaceutical Chemistry, Softvision College, Indore 452010, Madhya Pradesh, India.

出版信息

Interdiscip Sci. 2013 Jun;5(2):150-4. doi: 10.1007/s12539-013-0162-0. Epub 2013 Jun 6.

Abstract

Global QSAR models predict biological response of molecular structures which are generic in particular class. A global QSAR dataset admits structural features derived from larger chemical space, intricate to model but more applicable in medicinal chemistry. The present work is global in either sense of structural diversity in QSAR dataset or large number of descriptor input. Forty phenethylamine structure derivatives were selected from a large pool (904) of similar phenethylamines available in Pubchem database. LogP values of selected candidates were collected from physical properties database (PHYSPROP) determined in identical set of conditions. Attempts to model logP value have produced significant QSAR models. MLR aided linear one-variable and two-variable QSAR models with their respective R(2) (0.866, 0.937), R(2)A (0.862, 0.932), F-stat (181.936, 199.812) and Standard Error (0.365, 0.255) are statistically fit and found predictive after internal validation and external validation. The descriptors chosen after improvisation and optimization reveal mechanistic part of work in terms of Verhaar model of Fish base-line toxicity from MLOGP, i.e. (BLTF96) and 3D-MoRSE -signal 15 /unweighted molecular descriptor calculated by summing atom weights viewed by a different angular scattering function (Mor15u) are crucial in regulation of logP values of phenethylamines.

摘要

全局定量构效关系(QSAR)模型可预测具有特定类属通用性的分子结构的生物学反应。全局 QSAR 数据集允许从更大的化学空间中提取结构特征,这些特征虽然复杂但更适用于药物化学。本工作在 QSAR 数据集的结构多样性或大量描述符输入方面均具有全局意义。从 Pubchem 数据库中可用的大量类似苯乙胺(904 种)中选择了 40 种苯乙胺结构衍生物。从物理性质数据库(PHYSPROP)中收集了选定候选物的 LogP 值,这些值是在相同条件下确定的。尝试对 LogP 值进行建模,得到了具有显著 QSAR 模型的结果。MLR 辅助的线性单变量和双变量 QSAR 模型,其各自的 R²(0.866、0.937)、R²A(0.862、0.932)、F-统计量(181.936、199.812)和标准误差(0.365、0.255)在内部验证和外部验证后具有统计学意义,且可预测。经过改进和优化后选择的描述符揭示了 Fish 基线毒性的 Verhaar 模型中从 MLOGP 计算的(BLTF96)和 3D-MoRSE-信号 15/未加权分子描述符的工作机制部分,即 3D-MoRSE-信号 15/未加权分子描述符是调节苯乙胺 LogP 值的关键因素。

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