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樗蚕蛾的完整线粒体基因组,桑天牛,桑天牛(鳞翅目:天蚕蛾科)。

The complete mitochondrial genome of the Ailanthus silkmoth, Samia cynthia cynthia (Lepidoptera: Saturniidae).

机构信息

Department of Applied Biology, College of Life Science, Soochow University, Suzhou 215123, China.

出版信息

Gene. 2013 Sep 10;526(2):309-17. doi: 10.1016/j.gene.2013.05.048. Epub 2013 Jun 5.

Abstract

The complete mitochondrial genome (mitogenome) of the Ailanthus silkmoth, Samia cynthia cynthia (Lepidoptera: Saturniidae) was determined. The circular genome is 15,345 bp long, and presents a typical gene organization and order for sequenced mitogenomes of Bombycidea species. The nucleotide composition of the genome is highly A+T biased, accounting for 79.86%. The AT skew of the genome is slightly negative, indicating the occurrence of more Ts than As, as found in other Saturniidae species. All protein-coding genes (PCGs) are initiated by ATN codons, except for COI and COII, which are tentatively designated by CGA and GTG, respectively, as observed in other insects. Four of 13 PCGs, including COI, COII, ATP6, and ND3, harbor the incomplete termination codons, T or TA. With an exception for tRNASer(AGN), all other tRNAs can form a typical clover-leaf structure of mitochondrial tRNA. The 359 bp A+T-rich region of S. c. cynthia contains non-repetitive sequences, but harbors several features common to the Bombycidea insects, including the motif ATAGA followed by a poly-T stretch of 19 bp, a microsatellite-like (AT)7 element preceded by the ATTTA motif, and a poly-A element upstream tRNAMet. The phylogenetic analyses support the morphology-based current hypothesis that Bombycidae and Saturniidae are monophyletic. Our result confirms that Saturniini and Attacini form a reciprocal monophyletic group within Saturniidae.

摘要

舞毒蛾线粒体基因组全序列的测定及分析。舞毒蛾的线粒体基因组为 15345bp,呈典型的重链折叠结构,基因组成和排列顺序与已报道的鳞翅目昆虫一致。基因组碱基组成中 A+T 含量较高(79.86%),A+T 偏向性明显。基因组的 AT skew 为负值,表明在其它鳞翅目昆虫中存在的 Ts 略多于 As。所有的蛋白质编码基因(PCGs)起始密码子均为 ATN,COI 和 COII 基因起始密码子分别为 CGA 和 GTG,与已报道的其它鳞翅目昆虫相同。13 个 PCGs 中有 4 个(COI、COII、ATP6 和 ND3)存在不完全终止密码子 T 或 TA。除 tRNASer(AGN)外,其它 tRNA 二级结构均能形成典型的三叶草型结构。A+T 富含区长 359bp,富含区中存在非重复序列,同时具有鳞翅目昆虫 Bombycidea 类群的一些特征,包括 ATAGA 之后紧跟 19bp 的多 T 区、ATTTA 之后的微卫星(AT)7 元件以及 tRNAMet 上游的多 A 区。系统进化分析结果支持鳞翅目昆虫中天蚕蛾科和毒蛾科为单系群的观点,同时证实了毒蛾亚科内 Saturniini 和 Attacini 为互为姐妹群的关系。

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