Department of Genetics, Instituto de Investigacion Sanitaria-Fundacion Jimenez Diaz (IIS-FJD), Madrid, Spain; Centro de Investigacion Biomedica en Red (CIBER) de Enfermedades Raras, ISCIII, Madrid, Spain.
Ophthalmology. 2013 Nov;120(11):2332-7. doi: 10.1016/j.ophtha.2013.04.002. Epub 2013 Jun 4.
To provide a comprehensive overview of all detected mutations in the ABCA4 gene in Spanish families with autosomal recessive retinal disorders, including Stargardt's disease (arSTGD), cone-rod dystrophy (arCRD), and retinitis pigmentosa (arRP), and to assess genotype-phenotype correlation and disease progression in 10 years by considering the type of variants and age at onset.
Case series.
A total of 420 unrelated Spanish families: 259 arSTGD, 86 arCRD, and 75 arRP.
Spanish families were analyzed through a combination of ABCR400 genotyping microarray, denaturing high-performance liquid chromatography, and high-resolution melting scanning. Direct sequencing was used as a confirmation technique for the identified variants. Screening by multiple ligation probe analysis was used to detect possible large deletions or insertions in the ABCA4 gene. Selected families were analyzed further by next generation sequencing.
DNA sequence variants, mutation detection rates, haplotypes, age at onset, central or peripheral vision loss, and night blindness.
Overall, we detected 70.5% and 36.6% of all expected ABCA4 mutations in arSTGD and arCRD patient cohorts, respectively. In the fraction of the cohort where the ABCA4 gene was sequenced completely, the detection rates reached 73.6% for arSTGD and 66.7% for arCRD. However, the frequency of possibly pathogenic ABCA4 alleles in arRP families was only slightly higher than that in the general population. Moreover, in some families, mutations in other known arRP genes segregated with the disease phenotype.
An increasing understanding of causal ABCA4 alleles in arSTGD and arCRD facilitates disease diagnosis and prognosis and also is paramount in selecting patients for emerging clinical trials of therapeutic interventions. Because ABCA4-associated diseases are evolving retinal dystrophies, assessment of age at onset, accurate clinical diagnosis, and genetic testing are crucial. We suggest that ABCA4 mutations may be associated with a retinitis pigmentosa-like phenotype often as a consequence of severe (null) mutations, in cases of long-term, advanced disease, or both. Patients with classical arRP phenotypes, especially from the onset of the disease, should be screened first for mutations in known arRP genes and not ABCA4.
全面概述西班牙常染色体隐性视网膜疾病(包括 Stargardt 病(arSTGD)、锥杆营养不良(arCRD)和视网膜色素变性(arRP))家系中 ABCA4 基因的所有检测到的突变,评估 10 年的基因型-表型相关性和疾病进展,同时考虑变异类型和发病年龄。
病例系列。
共 420 个无关的西班牙家系:259 个 arSTGD、86 个 arCRD 和 75 个 arRP。
通过 ABCR400 基因分型微阵列、变性高效液相色谱和高分辨率熔解扫描组合分析西班牙家系。直接测序被用作鉴定变异的确认技术。多重连接探针分析用于检测 ABCA4 基因中可能的大片段缺失或插入。选择的家系进一步进行下一代测序分析。
DNA 序列变异、突变检测率、单倍型、发病年龄、中心或周边视力丧失和夜盲。
总体而言,我们在 arSTGD 和 arCRD 患者队列中分别检测到了 70.5%和 36.6%的预期 ABCA4 突变。在完全测序 ABCA4 基因的队列中,arSTGD 的检测率达到了 73.6%,arCRD 的检测率达到了 66.7%。然而,arRP 家系中可能致病的 ABCA4 等位基因的频率略高于一般人群。此外,在一些家系中,其他已知的 arRP 基因中的突变与疾病表型共分离。
对 arSTGD 和 arCRD 中因果 ABCA4 等位基因的认识不断加深,有助于疾病的诊断和预后,对选择接受新兴治疗干预临床试验的患者也至关重要。由于 ABCA4 相关疾病是进行性视网膜营养不良,因此评估发病年龄、准确的临床诊断和基因检测至关重要。我们建议,在长期、晚期疾病或两者都存在的情况下,ABC4 突变可能与视网膜色素变性样表型相关,尤其是由严重(无功能)突变引起的。具有典型 arRP 表型的患者,尤其是从疾病发病开始,应首先筛查已知 arRP 基因而非 ABCA4 基因的突变。