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结核分枝杆菌 Rv3406 是一种 II 型烷磺酸酯酶,能够进行硫酸盐的清除。

Mycobacterium tuberculosis Rv3406 is a type II alkyl sulfatase capable of sulfate scavenging.

机构信息

Department of Chemistry, University of California, Berkeley, California, United States of America.

出版信息

PLoS One. 2013 Jun 6;8(6):e65080. doi: 10.1371/journal.pone.0065080. Print 2013.

Abstract

The genome of Mycobacterium tuberculosis (Mtb) encodes nine putative sulfatases, none of which have a known function or substrate. Here, we characterize Mtb's single putative type II sulfatase, Rv3406, as a non-heme iron (II) and α-ketoglutarate-dependent dioxygenase that catalyzes the oxidation and subsequent cleavage of alkyl sulfate esters. Rv3406 was identified based on its homology to the alkyl sulfatase AtsK from Pseudomonas putida. Using an in vitro biochemical assay, we confirmed that Rv3406 is a sulfatase with a preference for alkyl sulfate substrates similar to those processed by AtsK. We determined the crystal structure of the apo Rv3406 sulfatase at 2.5 Å. The active site residues of Rv3406 and AtsK are essentially superimposable, suggesting that the two sulfatases share the same catalytic mechanism. Finally, we generated an Rv3406 mutant (Δrv3406) in Mtb to study the sulfatase's role in sulfate scavenging. The Δrv3406 strain did not replicate in minimal media with 2-ethyl hexyl sulfate as the sole sulfur source, in contrast to wild type Mtb or the complemented strain. We conclude that Rv3406 is an iron and α-ketoglutarate-dependent sulfate ester dioxygenase that has unique substrate specificity that is likely distinct from other Mtb sulfatases.

摘要

结核分枝杆菌(Mtb)的基因组编码了九个假定的硫酸盐酶,其中没有一个具有已知的功能或底物。在这里,我们将 Mtb 的单个假定的 II 型硫酸盐酶 Rv3406 表征为非血红素铁(II)和 α-酮戊二酸依赖性双加氧酶,它催化烷基硫酸盐酯的氧化和随后的裂解。Rv3406 是基于其与假单胞菌的烷基磺酸盐酶 AtsK 的同源性而被鉴定的。使用体外生化测定,我们证实 Rv3406 是一种硫酸盐酶,对烷基硫酸盐底物具有类似于 AtsK 处理的偏好。我们确定了 apo Rv3406 硫酸盐酶的晶体结构,分辨率为 2.5 Å。Rv3406 和 AtsK 的活性位点残基基本可以叠加,表明这两种硫酸盐酶具有相同的催化机制。最后,我们在 Mtb 中生成了一个 Rv3406 突变体(Δrv3406),以研究硫酸盐酶在硫酸盐摄取中的作用。与野生型 Mtb 或互补菌株相比,Δrv3406 菌株不能在以 2-乙基己基硫酸盐为唯一硫源的最小培养基中复制。我们得出结论,Rv3406 是一种铁和 α-酮戊二酸依赖性硫酸盐酯双加氧酶,具有独特的底物特异性,可能与其他 Mtb 硫酸盐酶不同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6e2/3675115/9e9901d4fb10/pone.0065080.g001.jpg

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