Department of Statistics, North Carolina State University, Raleigh, USA.
SAR QSAR Environ Res. 2013;24(9):711-31. doi: 10.1080/1062936X.2013.792875. Epub 2013 Jun 14.
Quantitative structure-activity relationship (QSAR) models have been widely used to study the permeability of chemicals or solutes through skin. Among the various QSAR models, Abraham's linear free-energy relationship (LFER) model is often employed. However, when the experimental conditions are complex, it is not always appropriate to use Abraham's LFER model with a single set of regression coefficients. In this paper, we propose an expanded model in which one set of partial slopes is defined for each experimental condition, where conditions are defined according to solvent: water, synthetic oil, semi-synthetic oil, or soluble oil. This model not only accounts for experimental conditions but also improves the ability to conduct rigorous hypothesis testing. To more adequately evaluate the predictive power of the QSAR model, we modified the usual leave-one-out internal validation strategy to employ a leave-one-solute-out strategy and accordingly adjust the Q(2) LOO statistic. Skin permeability was shown to have the rank order: water > synthetic > semi-synthetic > soluble oil. In addition, fitted relationships between permeability and solute characteristics differ according to solvents. We demonstrated that the expanded model (r(2) = 0.70) improved both the model fit and the predictive power when compared with the simple model (r(2) = 0.21).
定量构效关系 (QSAR) 模型已广泛用于研究化学品或溶质通过皮肤的渗透性。在各种 QSAR 模型中,常采用 Abraham 的线性自由能关系 (LFER) 模型。然而,当实验条件复杂时,使用具有单一回归系数的 Abraham 的 LFER 模型并不总是合适的。在本文中,我们提出了一个扩展模型,其中为每个实验条件定义了一组部分斜率,其中条件根据溶剂定义:水、合成油、半合成油或可溶油。该模型不仅考虑了实验条件,而且提高了进行严格假设检验的能力。为了更充分地评估 QSAR 模型的预测能力,我们修改了常用的留一法内部验证策略,采用留一溶质法,并相应调整 Q(2) 留一统计量。皮肤渗透性的顺序为:水 > 合成 > 半合成 > 可溶油。此外,根据溶剂,渗透系数与溶质特性之间的拟合关系也有所不同。我们证明,与简单模型 (r(2) = 0.21) 相比,扩展模型 (r(2) = 0.70) 提高了模型拟合度和预测能力。