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韩国本土牛瘤胃中分离得到的一株甲烷短杆菌,命名为甲烷短杆菌韩国亚种。

Methanobrevibacter boviskoreani sp. nov., isolated from the rumen of Korean native cattle.

机构信息

Korean Collection for Type Cultures (KCTC), Biological Resource Center (BRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahangno, Yuseong-gu, Daejeon, 305-806, Republic of Korea.

College of Agriculture & Life Sciences, Chungnam National University, Yuseong-gu, Daejeon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4196-4201. doi: 10.1099/ijs.0.054056-0. Epub 2013 Jun 14.

Abstract

Three strictly anaerobic, methanogenic strains JH1(T), JH4 and JH8 were isolated from rumen of the Korean native cattle (HanWoo; Bos taurus coreanae) in South Korea. The colonies were circular, opaque, and slightly yellowish. Phylogenetic analyses of 16S rRNA gene and mcrA (encoding α subunit of methyl-coenzyme M reductase) sequences confirmed the affiliation of the novel strains with the Methanobacteriales, and Methanobrevibacter wolinii SH(T) was the most closely related species. The 16S rRNA gene and mcrA sequence similarities between strains JH1(T), JH4 and JH8 and M. wolinii SH(T) were 96.2 and 89.0 % respectively, and DNA-DNA hybridization of the isolates and M. wolinii DSM 11976(T) showed a 20 % reassociation. Strain JH1(T) exhibited 92 % DNA-DNA relatedness with strains JH4 and JH8, and their 16S rRNA gene and mcrA sequences were identical. Cells stained Gram-positive and were non-motile rods, 1.5-1.8 µm long and 0.6 µm wide. The strains were able to use H2/CO2 and formate. The optimum temperature and pH ranges for growth were 37-40 °C and pH 6.5-7.0. The DNA G+C content of strain JH1(T) was 28 mol%. Based on data from this study using a polyphasic approach, the three strains represent a novel species of genus Methanobrevibacter, for which the name Methanobrevibacter boviskoreani sp. nov. is proposed. The type strain is JH1(T) ( = KCTC 4102(T) = JCM 18376(T)).

摘要

从韩国韩牛(Bos taurus coreanae)瘤胃中分离到三株严格厌氧、产甲烷的菌株 JH1(T)、JH4 和 JH8。菌落圆形、不透明、略带黄色。16S rRNA 基因和 mcrA(编码甲基辅酶 M 还原酶α亚基)序列的系统发育分析证实了这些新菌株与甲烷杆菌目(Methanobacteriales)的相关性,并且 Methanobrevibacter wolinii SH(T)是最密切相关的物种。菌株 JH1(T)、JH4 和 JH8 与 M. wolinii SH(T)的 16S rRNA 基因和 mcrA 序列相似性分别为 96.2%和 89.0%,并且这些分离株与 M. wolinii DSM 11976(T)的 DNA-DNA 杂交显示 20%的再结合。菌株 JH1(T)与菌株 JH4 和 JH8 的 DNA-DNA 相关性为 92%,它们的 16S rRNA 基因和 mcrA 序列完全相同。细胞染色革兰氏阳性,为无动力的杆状,长 1.5-1.8 µm,宽 0.6 µm。这些菌株能够利用 H2/CO2 和甲酸盐。生长的最适温度和 pH 范围分别为 37-40°C 和 pH 6.5-7.0。菌株 JH1(T)的 DNA G+C 含量为 28 mol%。基于使用多相方法的这项研究的数据,这三株代表了 Methanobrevibacter 属的一个新种,提议将其命名为 Methanobrevibacter boviskoreani sp. nov.。模式菌株为 JH1(T)( = KCTC 4102(T) = JCM 18376(T))。

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