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计算成本低廉的 GIAO 13C NMR 计算与人工神经网络模式识别的成功结合:一种用于简单快速检测结构错误分配的新策略。

Successful combination of computationally inexpensive GIAO 13C NMR calculations and artificial neural network pattern recognition: a new strategy for simple and rapid detection of structural misassignments.

机构信息

Instituto de Química Rosario (CONICET), Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Suipacha 531, Rosario (2000), Argentina.

出版信息

Org Biomol Chem. 2013 Aug 7;11(29):4847-59. doi: 10.1039/c3ob40843d. Epub 2013 Jun 19.

Abstract

GIAO NMR chemical shift calculations coupled with trained artificial neural networks (ANNs) have been shown to provide a powerful strategy for simple, rapid and reliable identification of structural misassignments of organic compounds using only one set of both computational and experimental data. The geometry optimization, usually the most time-consuming step in the overall procedure, was carried out using computationally inexpensive methods (MM+, AM1 or HF/3-21G) and the NMR shielding constants at the affordable mPW1PW91/6-31G(d) level of theory. As low quality NMR prediction is typically obtained with such protocols, the decision making was foreseen as a problem of pattern recognition. Thus, given a set of statistical parameters computed after correlation between experimental and calculated chemical shifts the classification was done using the knowledge derived from trained ANNs. The training process was carried out with a set of 200 molecules chosen to provide a wide array of chemical functionalities and molecular complexity, and the results were validated with a set of 26 natural products that had been incorrectly assigned along with their 26 revised structures. The high prediction effectiveness observed makes this method a suitable test for rapid identification of structural misassignments, preventing not only the publication of wrong structures but also avoiding the consequences of such a mistake.

摘要

GIAO NMR 化学位移计算与经过训练的人工神经网络 (ANNs) 相结合,已被证明是一种强大的策略,可仅使用一组计算和实验数据,对有机化合物的结构错误分配进行简单、快速和可靠的识别。几何优化,通常是整个过程中最耗时的步骤,使用计算成本低的方法(MM+、AM1 或 HF/3-21G)和可负担得起的 mPW1PW91/6-31G(d)理论水平的 NMR 屏蔽常数来完成。由于此类方案通常会得到低质量的 NMR 预测,因此决策被视为模式识别问题。因此,给定一组在实验和计算化学位移之间相关后计算的统计参数,使用从经过训练的 ANNs 中获得的知识进行分类。训练过程是使用一组 200 个分子进行的,这些分子选择的目的是提供广泛的化学功能和分子复杂性,并且使用一组 26 种天然产物进行了验证,这些天然产物的结构被错误分配,同时还提供了它们的 26 个修订结构。观察到的高预测效果使该方法成为快速识别结构错误分配的合适测试,不仅可以防止错误结构的发表,还可以避免此类错误的后果。

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