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从尼罗罗非鱼(Oreochromis niloticus,L.)中分离出的停乳链球菌菌株的基因分型。

Genotyping of Streptococcus dysgalactiae strains isolated from Nile tilapia, Oreochromis niloticus (L.).

作者信息

Costa F A A, Leal C A G, Leite R C, Figueiredo H C P

机构信息

AQUAVET, Laboratory of Aquatic Animal Diseases, Veterinary School, Federal University of Minas Gerais ("Universidade Federal de Minas Gerais"), Belo Horizonte, MG, Brazil.

出版信息

J Fish Dis. 2014 May;37(5):463-9. doi: 10.1111/jfd.12125. Epub 2013 Jun 21.

Abstract

Streptococcus dysgalactiae is an emerging fish pathogen that is responsible for outbreaks of disease on fish farms around the world. Recently, this bacterium was associated with an outbreak at a Nile tilapia, Oreochromis niloticus (L.), farm in Brazil. The aim of this study was to evaluate the genetic diversity, best genotyping method and aspects of molecular epidemiology of S. dysgalactiae infections in Nile tilapia farms in Brazil. Twenty-one isolates from four farms located in different Brazilian states were characterized genetically using pulsed-field gel electrophoresis (PFGE), ERIC-PCR, REP-PCR and sodA gene sequencing. The discriminatory power of the different typing methods was compared using Simpson's index of diversity. Identical sodA gene sequences were obtained from all isolates, and ERIC-PCR and REP-PCR were unable to discriminate among the isolates. PFGE typing detected three different genetic patterns between the 21 strains evaluated; thus, it was the best genotyping method for use with this pathogen. The strains from Ceará State were genetically divergent from those from Alagoas State. The S. dysgalactiae isolates analysed in this study constituted a genetically diverse population with a clear association between geographical origin and genotype.

摘要

乳房链球菌是一种新出现的鱼类病原体,可导致世界各地养鱼场疾病的爆发。最近,这种细菌与巴西一家尼罗罗非鱼(Oreochromis niloticus,L.)养殖场的一次疫情有关。本研究的目的是评估巴西尼罗罗非鱼养殖场中乳房链球菌感染的遗传多样性、最佳基因分型方法及分子流行病学方面。使用脉冲场凝胶电泳(PFGE)、ERIC-PCR、REP-PCR和sodA基因测序对来自巴西不同州四个养殖场的21株分离株进行遗传特征分析。使用辛普森多样性指数比较不同分型方法的鉴别力。所有分离株均获得相同的sodA基因序列,并且ERIC-PCR和REP-PCR无法区分这些分离株。PFGE分型在评估的21株菌株中检测到三种不同基因型;因此,它是用于该病原体的最佳基因分型方法。塞阿拉州的菌株与阿拉戈斯州的菌株在遗传上存在差异。本研究中分析的乳房链球菌分离株构成了一个遗传多样的群体,地理来源与基因型之间存在明显关联。

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