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勒克氏菌属菌株UCD - THU(放线菌门)的基因组序列草图

Draft Genome Sequence of Leucobacter sp. Strain UCD-THU (Phylum Actinobacteria).

作者信息

Holland-Moritz Hannah E, Bevans Dakota R, Lang Jenna M, Darling Aaron E, Eisen Jonathan A, Coil David A

机构信息

University of California Davis Genome Center, Davis, California, USA.

出版信息

Genome Announc. 2013 Jun 27;1(3):e00325-13. doi: 10.1128/genomeA.00325-13.

DOI:10.1128/genomeA.00325-13
PMID:23792744
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3675516/
Abstract

Here we present the draft genome of Leucobacter sp. strain UCD-THU. The genome contains 3,317,267 bp in 11 scaffolds. This strain was isolated from a residential toilet as part of an undergraduate project to sequence reference genomes of microbes from the built environment.

摘要

在此,我们展示了勒克氏菌属菌株UCD - THU的基因组草图。该基因组由11个支架组成,包含3317267个碱基对。此菌株是从一个居民厕所中分离出来的,这是一个本科项目的一部分,该项目旨在对来自建筑环境的微生物参考基因组进行测序。

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本文引用的文献

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Draft Genome Sequence of Microbacterium sp. Strain UCD-TDU (Phylum Actinobacteria).微小杆菌属菌株UCD - TDU(放线菌门)的基因组序列草图
Genome Announc. 2013 Mar 21;1(2):e0012013. doi: 10.1128/genomeA.00120-13.
2
Draft genome sequence of an Actinobacterium, Brachybacterium muris strain UCD-AY4.一种放线菌——鼠短杆菌UCD-AY4菌株的基因组序列草图
Genome Announc. 2013 Mar 21;1(2):e0008613. doi: 10.1128/genomeA.00086-13.
3
Leucobacter denitrificans sp. nov., isolated from cow dung.从牛粪中分离得到一株新的脱硝杆菌 Leucobacter denitrificans sp. nov.
J Microbiol. 2012 Feb;50(1):161-5. doi: 10.1007/s12275-012-1324-1. Epub 2012 Feb 27.
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Draft genome sequence of Leucobacter chromiiresistens, an extremely chromium-tolerant strain.嗜酸嘉利翁氏菌的基因组草图,一种具有极强耐铬能力的菌株。
J Bacteriol. 2012 Jan;194(2):540-1. doi: 10.1128/JB.06413-11.
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FastTree 2--approximately maximum-likelihood trees for large alignments.FastTree 2--用于大型比对的近似最大似然树。
PLoS One. 2010 Mar 10;5(3):e9490. doi: 10.1371/journal.pone.0009490.
6
Leucobacter chironomi sp. nov., a chromate-resistant bacterium isolated from a chironomid egg mass.嗜摇蚊勒克菌(Leucobacter chironomi)新种,一种从摇蚊卵块中分离出的耐铬细菌。
Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):665-70. doi: 10.1099/ijs.0.004663-0.
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BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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Leucobacter luti sp. nov., and Leucobacter alluvii sp. nov., two new species of the genus Leucobacter isolated under chromium stress.嗜铬勒克氏菌新种和冲积勒克氏菌新种,在铬胁迫下分离出的勒克氏菌属两个新物种。
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