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鉴定酿酒酵母 Rad51 重组酶与 DNA 转位酶 Rdh54 之间的相互作用

Characterization of the interaction between the Saccharomyces cerevisiae Rad51 recombinase and the DNA translocase Rdh54.

机构信息

Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, New York 10016, USA.

出版信息

J Biol Chem. 2013 Jul 26;288(30):21999-2005. doi: 10.1074/jbc.M113.480475. Epub 2013 Jun 24.

DOI:10.1074/jbc.M113.480475
PMID:23798704
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3724653/
Abstract

The Saccharomyces cerevisiae Rdh54 protein is a member of the Swi2/Snf2 family of DNA translocases required for meiotic and mitotic recombination and DNA repair. Rdh54 interacts with the general recombinases Rad51 and Dmc1 and promotes D-loop formation with either recombinase. Rdh54 also mediates the removal of Rad51 from undamaged chromatin in mitotic cells, which prevents formation of nonrecombinogenic complexes that can otherwise become toxic for cell growth. To determine which of the mitotic roles of Rdh54 are dependent on Rad51 complex formation, we finely mapped the Rad51 interaction domain in Rdh54, generated N-terminal truncation variants, and characterized their attributes biochemically and in cells. Here, we provide evidence suggesting that the N-terminal region of Rdh54 is not necessary for the response to the DNA-damaging agent methyl methanesulfonate. However, truncation variants missing 75-200 residues at the N terminus are sensitive to Rad51 overexpression. Interestingly, a hybrid protein containing the N-terminal region of Rad54, responsible for Rad51 interaction, fused to the Swi2/Snf2 core of Rdh54 is able to effectively complement the sensitivity to both methyl methanesulfonate and excess Rad51 in rdh54 null cells. Altogether, these results reveal a distinction between damage sensitivity and Rad51 removal with regard to Rdh54 interaction with Rad51.

摘要

酿酒酵母 Rdh54 蛋白是一种 Swi2/Snf2 家族的 DNA 转位酶,在有丝分裂和减数分裂重组以及 DNA 修复中是必需的。Rdh54 与一般重组酶 Rad51 和 Dmc1 相互作用,并促进与任何一种重组酶形成 D 环。Rdh54 还介导 Rad51 从有丝分裂细胞中未受损的染色质上的去除,这防止了可能对细胞生长有毒的非重组性复合物的形成。为了确定 Rdh54 的有丝分裂作用中哪些依赖于 Rad51 复合物的形成,我们精细地绘制了 Rdh54 中 Rad51 相互作用域的图谱,生成了 N 端截断变体,并从生化和细胞水平上对其特性进行了表征。在这里,我们提供的证据表明,Rdh54 的 N 端区域对于 DNA 损伤剂甲基甲磺酸甲烷磺酸的反应不是必需的。然而,缺失 N 端 75-200 个残基的截断变体对 Rad51 过表达敏感。有趣的是,一种含有 Rad54 的 N 端区域的杂种蛋白,该区域负责与 Rad51 相互作用,融合到 Rdh54 的 Swi2/Snf2 核心,能够有效地补充 rdh54 缺失细胞对甲基甲磺酸甲烷磺酸和过量 Rad51 的敏感性。总的来说,这些结果揭示了 Rdh54 与 Rad51 相互作用在损伤敏感性和 Rad51 去除方面的区别。

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本文引用的文献

1
Tid1/Rdh54 translocase is phosphorylated through a Mec1- and Rad53-dependent manner in the presence of DSB lesions in budding yeast.在芽殖酵母中,当双链断裂(DSB)损伤存在时,Tid1/Rdh54 易位酶通过依赖 Mek1 和 Rad53 的方式发生磷酸化。
DNA Repair (Amst). 2013 May 1;12(5):347-55. doi: 10.1016/j.dnarep.2013.02.004. Epub 2013 Mar 7.
2
Saccharomyces cerevisiae Dmc1 and Rad51 proteins preferentially function with Tid1 and Rad54 proteins, respectively, to promote DNA strand invasion during genetic recombination.酿酒酵母 Dmc1 和 Rad51 蛋白分别与 Tid1 和 Rad54 蛋白优先作用,以促进遗传重组过程中的 DNA 链入侵。
J Biol Chem. 2012 Aug 17;287(34):28727-37. doi: 10.1074/jbc.M112.373290. Epub 2012 Jun 29.
3
Swi2/Snf2-related translocases prevent accumulation of toxic Rad51 complexes during mitotic growth.Swi2/Snf2 相关转位酶可防止有丝分裂过程中有毒的 Rad51 复合物积累。
Mol Cell. 2010 Sep 24;39(6):862-72. doi: 10.1016/j.molcel.2010.08.028.
4
ATP-dependent chromatin remodeling by the Saccharomyces cerevisiae homologous recombination factor Rdh54.酿酒酵母同源重组因子Rdh54介导的ATP依赖型染色质重塑
J Biol Chem. 2008 Apr 18;283(16):10445-52. doi: 10.1074/jbc.M800082200. Epub 2008 Feb 20.
5
Mechanism of eukaryotic homologous recombination.真核生物同源重组的机制。
Annu Rev Biochem. 2008;77:229-57. doi: 10.1146/annurev.biochem.77.061306.125255.
6
A DNA-translocating Snf2 molecular motor: Saccharomyces cerevisiae Rdh54 displays processive translocation and extrudes DNA loops.一种DNA转运的Snf2分子马达:酿酒酵母Rdh54表现出持续性转运并挤出DNA环。
J Mol Biol. 2007 Jun 15;369(4):940-53. doi: 10.1016/j.jmb.2007.04.005. Epub 2007 Apr 5.
7
Tid1/Rdh54 promotes dissociation of Dmc1 from nonrecombinogenic sites on meiotic chromatin.Tid1/Rdh54促进Dmc1从减数分裂染色质上的非重组位点解离。
Genes Dev. 2006 Sep 15;20(18):2593-604. doi: 10.1101/gad.1447106.
8
Yeast recombination factor Rdh54 functionally interacts with the Rad51 recombinase and catalyzes Rad51 removal from DNA.酵母重组因子Rdh54与Rad51重组酶发生功能性相互作用,并催化Rad51从DNA上解离。
J Biol Chem. 2006 Sep 8;281(36):26268-79. doi: 10.1074/jbc.M602983200. Epub 2006 Jul 10.
9
Recombination protein Tid1p controls resolution of cohesin-dependent linkages in meiosis in Saccharomyces cerevisiae.重组蛋白Tid1p控制酿酒酵母减数分裂中黏连蛋白依赖性连接的解离。
J Cell Biol. 2005 Oct 24;171(2):241-53. doi: 10.1083/jcb.200505020. Epub 2005 Oct 17.
10
Recombination proteins in yeast.酵母中的重组蛋白。
Annu Rev Genet. 2004;38:233-71. doi: 10.1146/annurev.genet.38.072902.091500.