Centro de Estudos do Genoma Humano, Departamento de Biologia, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brasil.
Autism Res. 2013 Oct;6(5):354-61. doi: 10.1002/aur.1296. Epub 2013 Jun 25.
Identification of the causes of autism spectrum disorders (ASDs) is hampered by their genetic heterogeneity; however, the different genetic alterations leading to ASD seem to be implicated in the disturbance of common molecular pathways or biological processes. In this scenario, the search for differentially expressed genes (DEGs) between ASD patients and controls is a good alternative to identify the molecular etiology of such disorders. Here, we employed genome-wide expression analysis to compare the transcriptome of stem cells of human exfoliated deciduous teeth (SHEDs) of idiopathic autistic patients (n = 7) and control samples (n = 6). Nearly half of the 683 identified DEGs are expressed in the brain (P = 0.003), and a significant number of them are involved in mechanisms previously associated with ASD such as protein synthesis, cytoskeleton regulation, cellular adhesion and alternative splicing, which validate the use of SHEDs to disentangle the causes of autism. Autistic patients also presented overexpression of genes regulated by androgen receptor (AR), and AR itself, which in turn interacts with CHD8 (chromodomain helicase DNA binding protein 8), a gene recently shown to be associated with the cause of autism and found to be upregulated in some patients tested here. These data provide a rationale for the mechanisms through which CHD8 leads to these diseases. In summary, our results suggest that ASD share deregulated pathways and revealed that SHEDs represent an alternative cell source to be used in the understanding of the biological mechanisms involved in the etiology of ASD.
自闭症谱系障碍(ASD)的病因识别受到其遗传异质性的阻碍;然而,导致 ASD 的不同遗传改变似乎与常见的分子途径或生物学过程的紊乱有关。在这种情况下,在 ASD 患者和对照组之间寻找差异表达基因(DEGs)是识别此类疾病分子病因的一种很好的替代方法。在这里,我们采用全基因组表达分析来比较特发性自闭症患者(n = 7)和对照样本(n = 6)的人脱落乳牙干细胞(SHED)的转录组。鉴定的近一半 683 个 DEGs 在大脑中表达(P = 0.003),其中相当数量的基因参与了先前与 ASD 相关的机制,如蛋白质合成、细胞骨架调节、细胞黏附和选择性剪接,这验证了使用 SHEDs 来阐明自闭症的原因。自闭症患者还表现出雄激素受体(AR)调节基因和 AR 本身的过表达,而 AR 又与 CHD8(染色质螺旋酶 DNA 结合蛋白 8)相互作用,CHD8 是最近与自闭症病因相关的基因,在本研究中检测到一些患者的基因表达上调。这些数据为 CHD8 导致这些疾病的机制提供了依据。总之,我们的结果表明,ASD 存在失调的途径,并表明 SHEDs 代表了一种替代的细胞来源,可用于理解 ASD 病因中涉及的生物学机制。