Department of Physics, George Washington University, Washington, DC, USA.
Biophys J. 2013 Jul 2;105(1):194-9. doi: 10.1016/j.bpj.2013.05.021.
The nucleosome is the first level of genome organization and regulation in eukaryotes where negatively charged DNA is wrapped around largely positively charged histone proteins. Interaction between nucleosomes is dominated by electrostatics at long range and guided by specific contacts at short range, particularly involving their flexible histone tails. We have thus quantified how internucleosome interactions are modulated by salts (KCl, MgCl2) and histone tail deletions (H3, H4 N-terminal), using small-angle x-ray scattering and theoretical modeling. We found that measured effective charges at low salts are ∼1/5th of the theoretically predicted renormalized charges and that H4 tail deletion suppresses the attraction at high salts to a larger extent than H3 tail deletion.
核小体是真核生物基因组组织和调控的第一个层次,带负电荷的 DNA 缠绕在带大量正电荷的组蛋白上。核小体之间的相互作用主要受长程静电作用控制,并由短程特定接触引导,特别是涉及它们的柔性组蛋白尾巴。因此,我们使用小角度 X 射线散射和理论建模来量化盐(KCl、MgCl2)和组蛋白尾巴缺失(H3、H4 N 端)如何调节核小体之间的相互作用。我们发现,在低盐条件下测量到的有效电荷约为理论预测的重归一化电荷的 1/5,并且 H4 尾巴缺失比 H3 尾巴缺失更能抑制高盐下的吸引力。