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PLoS One. 2012;7(5):e36526. doi: 10.1371/journal.pone.0036526. Epub 2012 May 4.
2
Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law.运用 Porod-Debye 定律,通过小角散射(SAS)对灵活的、固有无规的生物大分子进行特征描述。
Biopolymers. 2011 Aug;95(8):559-71. doi: 10.1002/bip.21638. Epub 2011 Apr 20.
3
Scaffold proteins IRSp53 and spinophilin regulate localized Rac activation by T-lymphocyte invasion and metastasis protein 1 (TIAM1).支架蛋白 IRSp53 和旋毛虫蛋白通过 T 淋巴细胞侵袭和转移蛋白 1(TIAM1)调节局部 Rac 激活。
J Biol Chem. 2010 Jun 4;285(23):18060-71. doi: 10.1074/jbc.M109.051490. Epub 2010 Apr 1.
4
Using Situs for the integration of multi-resolution structures.使用Situs进行多分辨率结构的整合。
Biophys Rev. 2010 Feb;2(1):21-27. doi: 10.1007/s12551-009-0026-3. Epub 2010 Jan 8.
5
XDS.XDS.(这个词如果没有更多背景信息,很难准确翻译出更有意义的内容,直接保留原文是一种处理方式,或者音译为“克斯达斯”之类,但感觉都不太符合常规翻译场景,你可以补充更多关于这个词的信息以便我更准确翻译 )
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32. doi: 10.1107/S0907444909047337. Epub 2010 Jan 22.
6
Molecular replacement with MOLREP.使用MOLREP进行分子置换。
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MolProbity: all-atom structure validation for macromolecular crystallography.MolProbity:用于大分子晶体学的全原子结构验证
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Distal interactions within the par3-VE-cadherin complex.par3-VE-cadherin 复合物内的远端相互作用。
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9
The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module.Tiam1/2 的 PHCCEx 结构域是一种新型的蛋白和膜结合模块。
EMBO J. 2010 Jan 6;29(1):236-50. doi: 10.1038/emboj.2009.323. Epub 2009 Nov 5.
10
Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.使用ARP/wARP 7版本进行X射线晶体学的自动化大分子模型构建。
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Tiam1 PHn-CC-Ex结构域的高分辨率结构。

High-resolution structure of the Tiam1 PHn-CC-Ex domain.

作者信息

Joshi Monika, Gakhar Lokesh, Fuentes Ernesto J

机构信息

Department of Biochemistry, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA 52242-1109, USA.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):744-52. doi: 10.1107/S1744309113014206. Epub 2013 Jun 27.

DOI:10.1107/S1744309113014206
PMID:23832200
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3702317/
Abstract

The T-lymphoma and metastasis gene 1 (TIAM1) encodes a guanine nucleotide-exchange factor protein (Tiam1) that is specific for the Rho-family GTPase Rac1 and is important for cell polarity, migration and adhesion. Tiam1 is a large multi-domain protein that contains several protein-protein binding domains that are important for regulating cellular function. The PHn-CC-Ex domain is critical for plasma-membrane association and interactions with protein-scaffold proteins (e.g. Par3b, spinophilin, IRSp53 and JIP2) that direct Tiam1-Rac1 signaling specificity. It was determined that the coiled-coil domain of Par3b binds the PHn-CC-Ex domain with a dissociation constant of ≈ 30 µM. Moreover, the structures of two variants of the Tiam1 PHn-CC-Ex domain were solved at resolutions of 1.98 and 2.15 Å, respectively. The structures indicate that the PHn, CC and Ex regions form independent subdomains that together provide an integrated platform for binding partner proteins. Small-angle X-ray scattering (SAXS) data indicate that the Tiam1 PHn-CC-Ex domain is monomeric in solution and that the solution and crystal structures are very similar. Together, these data provide the foundation necessary to elucidate the structural mechanism of the PHn-CC-Ex/scaffold interactions that are critical for Tiam1-Rac1 signaling specificity.

摘要

T淋巴细胞瘤转移基因1(TIAM1)编码一种鸟嘌呤核苷酸交换因子蛋白(Tiam1),该蛋白对Rho家族GTP酶Rac1具有特异性,对细胞极性、迁移和黏附至关重要。Tiam1是一种大型多结构域蛋白,包含几个对调节细胞功能很重要的蛋白质-蛋白质结合结构域。PHn-CC-Ex结构域对于质膜结合以及与指导Tiam1-Rac1信号特异性的蛋白质支架蛋白(如Par3b、亲嗜素、IRSp53和JIP2)的相互作用至关重要。已确定Par3b的卷曲螺旋结构域以约30µM的解离常数结合PHn-CC-Ex结构域。此外,分别以1.98和2.15Å的分辨率解析了Tiam1 PHn-CC-Ex结构域的两种变体的结构。这些结构表明,PHn、CC和Ex区域形成独立的亚结构域,共同为结合伴侣蛋白提供了一个整合平台。小角X射线散射(SAXS)数据表明,Tiam1 PHn-CC-Ex结构域在溶液中是单体,溶液结构和晶体结构非常相似。这些数据共同为阐明对Tiam1-Rac1信号特异性至关重要的PHn-CC-Ex/支架相互作用的结构机制提供了必要的基础。