Analytical Centre of the Mineralogical and Geochemical Researches, Institute of Geology and Nature Management FEB RAS, 1 Relochny Lane, Blagoveshchensk, Russia.
Biomed Res Int. 2013;2013:397278. doi: 10.1155/2013/397278. Epub 2013 Jun 13.
The taxonomic affiliation (in the systematisation of viruses, and biological domains) of known peptides and proteins of biomineralization (silicateins, silaffins, silacidins and silicase) and their primary structure homologues were analyzed (methods in silico; using Uniprot database). The total number of known peptides and proteins of biosilicification was counted. The data of the quantitative distribution of the detected homologues found in nature are presented. The similarity of the primary structures of silaffins, silacidins, silicateins, silicase, and their homologues was 21-94%, 45-98%, 39-50%, and 28-40%, respectively. These homologues are found in many organisms, from the Protista to the higher plants and animals, including humans, as well as in bacteria and extracellular agents, and they perform a variety of biological functions, such as biologically controlled mineralisation. The provisional classification of these biomineralization proteins is presented. The interrelation of the origin of the first organic polymers and biomineralization is discussed.
已知生物矿化(硅酸盐、硅蛋白、硅酸、硅酶)肽和蛋白质的分类归属(在病毒和生物领域的分类系统中)及其一级结构同源物进行了分析(计算机方法;使用 Uniprot 数据库)。统计了已知生物硅化肽和蛋白质的总数。给出了在自然界中检测到的同源物的定量分布数据。硅蛋白、硅酸、硅蛋白和硅酶及其同源物的一级结构相似性分别为 21-94%、45-98%、39-50%和 28-40%。这些同源物存在于许多生物体中,从原生生物到高等植物和动物,包括人类,以及细菌和细胞外物质,并具有多种生物功能,如生物控制矿化。提出了这些生物矿化蛋白的暂定分类。讨论了最早的有机聚合物和生物矿化的起源之间的关系。