Kong Fanna, Sun Peipei, Cao Min, Wang Li, Mao Yunxiang
College of Marine Life Sciences, Ocean University of China , Qingdao , China and.
Mitochondrial DNA. 2014 Oct;25(5):335-6. doi: 10.3109/19401736.2013.803538. Epub 2013 Jul 10.
Pyropia yezoensis Ueda, belonging to the Bangiales order Rhodophyte, is economically important seaweed distributed along the coastal region of the northwest Pacific. In this study, we report the complete mitochondrial DNA sequences of P. yezoensis. The entire genome comprised 41,688 bp with circular organization, which is the longest among the red algae sequenced to date. The overall AT composition is 62.22% and the average AT content of PCG, 16S rRNA, tRNA and noncoding region are 67.51%, 65.23%, 61.23% and 72.67%, respectively The mitochondrial DNA of P. yezoensis encoded 23 proteins, 4 open reading frames, 3 ribosomal RNAs and 27 transfer RNA genes. The comparison analyses showed that obvious variation occurred on the gene content and gene structure among P. yezoensis. P. haitanensis and Porphyra purpurea. Phylogenetic analysis revealed that P. yezoensis is more closely related to P. haitanensis than to P. purpurea, and P. purpurea was phylogenetically distinct from the two species, which confirmed the reassignment of Pyropia and Porphyra in Bangiaceae.
条斑紫菜(Pyropia yezoensis Ueda)属于红藻纲杉藻目,是一种具有重要经济价值的海藻,分布于西北太平洋沿岸地区。在本研究中,我们报道了条斑紫菜完整的线粒体DNA序列。整个基因组由41,688个碱基对组成,呈环状结构,是迄今为止已测序红藻中最长的。总体AT含量为62.22%,编码蛋白质基因(PCG)、16S rRNA、tRNA和非编码区的平均AT含量分别为67.51%、65.23%、61.23%和72.67%。条斑紫菜的线粒体DNA编码23种蛋白质、4个开放阅读框、3个核糖体RNA和27个转运RNA基因。比较分析表明,条斑紫菜、坛紫菜和紫菜(Porphyra purpurea)在基因含量和基因结构上存在明显差异。系统发育分析表明,条斑紫菜与坛紫菜的亲缘关系比与紫菜更近,紫菜在系统发育上与这两个物种不同,这证实了杉藻科中条斑紫菜属和紫菜属的重新分类。