PKscan：一款用于识别任意长度RNA序列中H型RNA假结的程序。
PKscan: a program to identify H-type RNA pseudoknots in any RNA sequence with unlimited length.
作者信息
Huang Xiaolan, Du Zhihua, Cheng Jie, Cheng Qiang
机构信息
Department of Computer Science, Southern Illinois University at Carbondale, IL 62901, USA.
出版信息
Bioinformation. 2013 May 25;9(9):440-2. doi: 10.6026/97320630009440. Print 2013.
A computer program written in C++ has been developed which can detect all potential H-type RNA pseudoknots within any given RNA sequence. There is no limit on the length of the input sequence. A validation run of the program using the full-length (8173 nt) genomic mRNA of simian retrovirus type-1 (SRV-1) identifies the established -1 frameshift stimulating pseudokont at the gagpro junction as the most stable pseudoknot within the genomic mRNA.
已经开发了一个用C++编写的计算机程序，它可以检测任何给定RNA序列中的所有潜在H型RNA假结。输入序列的长度没有限制。使用猿猴1型逆转录病毒（SRV-1）的全长（8173 nt）基因组mRNA对该程序进行验证运行，结果表明，在gagpro连接处已确定的-1移码刺激假结是基因组mRNA中最稳定的假结。
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