• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从分子特征预测环境相关化合物的水溶解度:一种基于潜在结构计划的简单但非常有效的四维模型。

Predicting aqueous solubility of environmentally relevant compounds from molecular features: a simple but highly effective four-dimensional model based on Project to Latent Structures.

机构信息

St. Anthony Falls Laboratory, University of Minnesota, Minneapolis, MN 55414, USA.

出版信息

Water Res. 2013 Sep 15;47(14):5362-70. doi: 10.1016/j.watres.2013.06.011. Epub 2013 Jun 15.

DOI:10.1016/j.watres.2013.06.011
PMID:23866150
Abstract

The aqueous solubility (log S) of xenobiotic chemicals has been identified as a key characteristic in determining their bioaccessibility/bioavailability and their fate and transport in aquatic environments. We here explore and evaluate the use of a state-of-the-art data analysis technique (Project to Latent Structures, PLS) to estimate log S of environmentally relevant chemicals. A large number (n = 624) of molecular descriptors was computed for over 1400 organic chemicals, and then refined by a feature selection technique. Candidate predictor descriptors were fitted to data by means of PLS, which was optimized by an internal leave-one-out cross-validation technique and validated by an external data set. The final (best) PLS model with only four variables (AlogP, X1sol, Mv, and E) exhibited noteworthy stability and good predictive power. It was able to explain 91% of the data (n = 1400) variance with an average absolute error of 0.5 log units through the solubilities span over 12 orders of magnitude. The newly proposed model is transparent, easily portable from one user to another, and robust enough to accurately estimate log S of a wide range of emerging contaminants.

摘要

外源性化学物质的水溶解度(log S)已被确定为决定其生物可及性/生物利用度以及在水生环境中的归宿和迁移的关键特性。在这里,我们探索并评估了使用最先进的数据分析技术(潜在结构计划,PLS)来估计环境相关化学物质的 log S。为超过 1400 种有机化学品计算了大量(n = 624)分子描述符,并通过特征选择技术进行了精炼。候选预测描述符通过 PLS 拟合到数据中,通过内部留一法交叉验证技术进行优化,并通过外部数据集进行验证。最终(最佳)PLS 模型仅使用四个变量(AlogP、X1sol、Mv 和 E)具有显著的稳定性和良好的预测能力。它能够通过跨越 12 个数量级的溶解度解释 91%的数据(n = 1400)方差,平均绝对误差为 0.5 log 单位。新提出的模型是透明的,易于在用户之间移植,并且足够稳健,可以准确估计广泛的新兴污染物的 log S。

相似文献

1
Predicting aqueous solubility of environmentally relevant compounds from molecular features: a simple but highly effective four-dimensional model based on Project to Latent Structures.从分子特征预测环境相关化合物的水溶解度:一种基于潜在结构计划的简单但非常有效的四维模型。
Water Res. 2013 Sep 15;47(14):5362-70. doi: 10.1016/j.watres.2013.06.011. Epub 2013 Jun 15.
2
Environmental toxicological fate prediction of diverse organic chemicals based on steady-state compartmental chemical mass ratio using quantitative structure-fate relationship (QSFR) models.基于稳态隔室化学质量比的定量构效-命运关系(QSFR)模型对多种有机化学品的环境毒理学命运预测。
Chemosphere. 2013 Jul;92(5):600-7. doi: 10.1016/j.chemosphere.2013.03.065. Epub 2013 May 2.
3
Modeling aqueous solubility.模拟水溶性。
J Chem Inf Comput Sci. 2003 May-Jun;43(3):837-41. doi: 10.1021/ci020279y.
4
Predicting organic carbon-water partitioning of hydrophobic organic chemicals in soils and sediments based on water solubility.基于水溶性预测土壤和沉积物中疏水性有机化学物质的有机碳-水分配
Water Res. 2008 Aug;42(14):3775-80. doi: 10.1016/j.watres.2008.07.003. Epub 2008 Jul 15.
5
Computational aqueous solubility prediction for drug-like compounds in congeneric series.同系物系列中类药物化合物的计算水溶解度预测
Eur J Med Chem. 2008 Mar;43(3):501-12. doi: 10.1016/j.ejmech.2007.04.009. Epub 2007 May 6.
6
Estimation of aqueous solubility of organic compounds with QSPR approach.采用定量结构-性质关系(QSPR)方法估算有机化合物的水溶性。
Pharm Res. 2002 Apr;19(4):497-503. doi: 10.1023/a:1015103914543.
7
Application of descriptors based on Lipinski's rules in the QSPR study of aqueous solubilities.基于Lipinski规则的描述符在水溶性定量构效关系(QSPR)研究中的应用。
Bioorg Med Chem. 2007 Jun 1;15(11):3711-9. doi: 10.1016/j.bmc.2007.03.044. Epub 2007 Mar 18.
8
Scores of extended connectivity fingerprint as descriptors in QSPR study of melting point and aqueous solubility.在熔点和水溶性的定量构效关系(QSPR)研究中,将扩展连接性指纹图谱分数用作描述符。
J Chem Inf Model. 2008 May;48(5):981-7. doi: 10.1021/ci800024c. Epub 2008 May 9.
9
Improved prediction of fish bioconcentration factor of hydrophobic chemicals.疏水性化学物质鱼类生物富集因子预测的改进
SAR QSAR Environ Res. 2004 Oct-Dec;15(5-6):449-55. doi: 10.1080/10629360412331297489.
10
Quantitative structure/property relationship analysis on aqueous solubility using genetic algorithm-combined partial least squares method.基于遗传算法结合偏最小二乘法的水溶性定量结构/性质关系分析
Pharmazie. 2002 Feb;57(2):127-9.

引用本文的文献

1
Polychlorinated Diphenyl Ethers in the Environment: A Review and Future Perspectives.多氯二苯醚在环境中的分布:综述与展望
Int J Environ Res Public Health. 2023 Feb 23;20(5):3982. doi: 10.3390/ijerph20053982.
2
Correlation between physicochemical properties of modified clinoptilolite and its performance in the removal of ammonia-nitrogen.改性斜发沸石的理化性质与其氨氮去除性能之间的相关性
Environ Monit Assess. 2017 Mar;189(3):107. doi: 10.1007/s10661-017-5806-9. Epub 2017 Feb 16.