Pasquale Louis R, Loomis Stephanie J, Weinreb Robert N, Kang Jae H, Yaspan Brian L, Bailey Jessica Cooke, Gaasterland Douglas, Gaasterland Terry, Lee Richard K, Scott William K, Lichter Paul R, Budenz Donald L, Liu Yutao, Realini Tony, Friedman David S, McCarty Catherine A, Moroi Sayoko E, Olson Lana, Schuman Joel S, Singh Kuldev, Vollrath Douglas, Wollstein Gadi, Zack Donald J, Brilliant Murray, Sit Arthur J, Christen William G, Fingert John, Kraft Peter, Zhang Kang, Allingham R Rand, Pericak-Vance Margaret A, Richards Julia E, Hauser Michael A, Haines Jonathan L, Wiggs Janey L
Department of Ophthalmology, Mass Eye & Ear Infirmary, Harvard Medical School, Boston, MA 02114, USA.
Mol Vis. 2013 Jul 12;19:1471-81. Print 2013.
Circulating estrogen levels are relevant in glaucoma phenotypic traits. We assessed the association between an estrogen metabolism single nucleotide polymorphism (SNP) panel in relation to primary open angle glaucoma (POAG), accounting for gender.
We included 3,108 POAG cases and 3,430 controls of both genders from the Glaucoma Genes and Environment (GLAUGEN) study and the National Eye Institute Glaucoma Human Genetics Collaboration (NEIGHBOR) consortium genotyped on the Illumina 660W-Quad platform. We assessed the relation between the SNP panels representative of estrogen metabolism and POAG using pathway- and gene-based approaches with the Pathway Analysis by Randomization Incorporating Structure (PARIS) software. PARIS executes a permutation algorithm to assess statistical significance relative to the pathways and genes of comparable genetic architecture. These analyses were performed using the meta-analyzed results from the GLAUGEN and NEIGHBOR data sets. We evaluated POAG overall as well as two subtypes of POAG defined as intraocular pressure (IOP) ≥22 mmHg (high-pressure glaucoma [HPG]) or IOP <22 mmHg (normal pressure glaucoma [NPG]) at diagnosis. We conducted these analyses for each gender separately and then jointly in men and women.
Among women, the estrogen SNP pathway was associated with POAG overall (permuted p=0.006) and HPG (permuted p<0.001) but not NPG (permuted p=0.09). Interestingly, there was no relation between the estrogen SNP pathway and POAG when men were considered alone (permuted p>0.99). Among women, gene-based analyses revealed that the catechol-O-methyltransferase gene showed strong associations with HTG (permuted gene p≤0.001) and NPG (permuted gene p=0.01).
The estrogen SNP pathway was associated with POAG among women.
循环雌激素水平与青光眼表型特征相关。我们评估了雌激素代谢单核苷酸多态性(SNP)面板与原发性开角型青光眼(POAG)之间的关联,并考虑了性别因素。
我们纳入了来自青光眼基因与环境(GLAUGEN)研究和国家眼科研究所青光眼人类遗传学协作组(NEIGHBOR)联盟的3108例POAG病例和3430例对照,这些病例和对照在Illumina 660W-Quad平台上进行了基因分型。我们使用基于通路和基因的方法,通过随机化纳入结构的通路分析(PARIS)软件,评估代表雌激素代谢的SNP面板与POAG之间的关系。PARIS执行一种置换算法,以评估相对于具有可比遗传结构的通路和基因的统计显著性。这些分析使用了GLAUGEN和NEIGHBOR数据集的荟萃分析结果。我们总体评估了POAG,以及在诊断时定义为眼压(IOP)≥22 mmHg(高压性青光眼[HPG])或IOP <22 mmHg(正常眼压性青光眼[NPG])的两种POAG亚型。我们分别对每种性别进行了这些分析,然后在男性和女性中联合进行分析。
在女性中,雌激素SNP通路与总体POAG(置换p = 0.006)和HPG(置换p <0.001)相关,但与NPG无关(置换p = 0.09)。有趣的是,单独考虑男性时,雌激素SNP通路与POAG之间没有关系(置换p> 0.99)。在女性中,基于基因的分析表明,儿茶酚-O-甲基转移酶基因与HTG(置换基因p≤0.001)和NPG(置换基因p = 0.01)有很强的关联。
雌激素SNP通路与女性POAG相关。